Alternatives and similar repositories for valr

Users that are interested in valr are comparing it to the libraries listed below

• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆73Updated last year
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 2 months ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆53Updated 3 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated last month
• Shians / Glimma
  Glimma R package
  ☆50Updated 9 months ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated last month
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated this week
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆38Updated 7 months ago
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆147Updated this week
• tgirke / systemPipeR
  Project Website:
  ☆54Updated last month
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆79Updated last month
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆113Updated last year
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆90Updated 2 years ago
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆26Updated last year
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆59Updated last year
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆23Updated 5 years ago
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆38Updated last year
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆28Updated 5 years ago
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated 3 weeks ago
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆90Updated 4 years ago
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆46Updated 7 months ago
• teunbrand / ggnomics
  A small project to add ggplot2 extensions
  ☆81Updated 3 years ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆66Updated 4 years ago
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆64Updated this week
• YuLab-SMU / aplot
  Decorate a plot with associated information
  ☆107Updated this week
• hansenlab / minfi
  Devel repository for minfi
  ☆59Updated last year
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆53Updated 4 years ago