MSKCC-Epi-Bio / gnomeRView external linksLinks
Package to wrangle and visualize genomic data in R
☆26Updated this week
Alternatives and similar repositories for gnomeR
Users that are interested in gnomeR are comparing it to the libraries listed below
Sorting:
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Jan 30, 2026Updated 2 weeks ago
- An outcome weighted supervised clustering algorithm, designed to classify patients according to their molecular as well as time-event or …☆16Apr 18, 2024Updated last year
- Longitudinal Mediation with Modified Treatment Policies☆12Sep 26, 2025Updated 4 months ago
- A ggplot interface for creating clincial trial swimlanes☆16Aug 2, 2022Updated 3 years ago
- Dependent Delayed Computation☆23Apr 29, 2024Updated last year
- R interface to NLM RxNorm API to get drug names and class based on RxCUI☆28Mar 25, 2025Updated 10 months ago
- Decision Curve Analysis☆44Nov 15, 2025Updated 2 months ago
- Doubly-Robust and Efficient Estimators for Survival and Ordinal Outcomes in RCTs Without Proportional Hazards or Odds Assumptions☆11Jun 26, 2025Updated 7 months ago
- Tools for detecting alternative splicing events and genotype in single-cell gene expression data.☆15Jan 16, 2024Updated 2 years ago
- Targeted Learning for Survival Analysis☆23Nov 19, 2023Updated 2 years ago
- Ensemble learning for let truncated high dimensional survival data☆17Dec 8, 2020Updated 5 years ago
- Miscellaneous collection of functions☆34May 23, 2024Updated last year
- Build tools for a drat☆17Jul 13, 2022Updated 3 years ago
- Nonparametric estimators of the average treatment effect with doubly-robust confidence intervals and hypothesis tests☆20Jan 4, 2023Updated 3 years ago
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Dec 22, 2025Updated last month
- ☆17Jan 9, 2023Updated 3 years ago
- R/haldensify: Highly Adaptive Lasso Conditional Density Estimation☆18Sep 6, 2025Updated 5 months ago
- for custom file structure templates accessible in R sessions outside the ones they were created in.☆22Nov 10, 2020Updated 5 years ago
- Use batch balanced KNN (BBKNN) in R☆13Sep 9, 2025Updated 5 months ago
- ☆10May 14, 2020Updated 5 years ago
- Subplex Optimization Algorithm☆11Nov 25, 2025Updated 2 months ago
- ☆10Apr 24, 2020Updated 5 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆20Apr 20, 2025Updated 9 months ago
- Regulatory Tables for Clinical Research☆40Dec 1, 2025Updated 2 months ago
- R Package: Augmented Inverse Probability Weighted (AIPW) Estimation for Average Causal Effect☆27Apr 5, 2025Updated 10 months ago
- Super learner fitting and prediction using mlr3☆11Feb 20, 2025Updated 11 months ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- Making and developing R packages☆20Jan 6, 2026Updated last month
- R/txshift: Efficient Estimation of the Causal Effects of Stochastic Interventions, with Corrections for Outcome-Dependent Sampling☆13Sep 21, 2024Updated last year
- Implementation of the Tower Method, a novel approach to handling missing values.☆12Mar 12, 2024Updated last year
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated 8 months ago
- ☆25Apr 26, 2020Updated 5 years ago
- Clinical trial simulation for time-to-event endpoints☆32Updated this week
- Declarative group-wise count and compute, describing your target table☆13Jan 8, 2026Updated last month
- Formatting extension for Quarto☆13Sep 22, 2023Updated 2 years ago
- A Reference Manager in R☆11Apr 10, 2025Updated 10 months ago
- ☆10Nov 30, 2022Updated 3 years ago
- nlmixr2 estimation routines☆12Feb 5, 2026Updated last week
- Work In Progress: GitHub API v3.0 implemented in R using the gh package☆18Dec 7, 2023Updated 2 years ago