Alternatives and similar repositories for survClust:

Users that are interested in survClust are comparing it to the libraries listed below

• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated 2 months ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated last month
• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆21Updated 2 months ago
• RTCGA / RTCGA
  Download, integration and visualizations of the variety & volume of TCGA data.
  ☆51Updated 2 years ago
• Nealelab / UKBB_ldsc
  Sample code for ldsc analyses in UKBB
  ☆30Updated last year
• ZAEDPolSl / MrGSEA
  MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…
  ☆9Updated 2 years ago
• omicsCore / SEQprocess
  SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
  ☆17Updated 4 years ago
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆38Updated last year
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆23Updated last year
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• opentargets / genetics-gold-standards
  GWAS gold standards repository
  ☆30Updated last year
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆70Updated this week
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆30Updated 3 months ago
• tgirke / systemPipeRdata
  NGS workflow templates and sample data
  ☆9Updated 3 months ago
• StantonLabDartmouth / AppScanGEO
  Source code for ScanGEO Shiny App
  ☆15Updated 2 years ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆20Updated last year
• leekgroup / recount-website
  Code for the Recount project
  ☆11Updated last month
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆19Updated 6 months ago
• kharchenkolab / sccore
  Core utilities for single-cell RNA-seq
  ☆12Updated last month
• mkanai / grimon
  R package for plotting 3D graphical visualization of multi-omics data.
  ☆22Updated 2 years ago
• QuantGen / BEDMatrix
  A matrix-like wrapper around PLINK .bed files
  ☆18Updated 4 months ago
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆19Updated last week
• Shians / CellBench
  R package for benchmarking single cell analysis methods
  ☆30Updated last year
• ebecht / hypergate
  ☆12Updated last year
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆20Updated 8 months ago
• Christensen-Lab-Dartmouth / methyLiftover
  A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set
  ☆17Updated 8 years ago
• elyadlezmi / RNA2CM
  Pipeline for the identification of cancer-related mutations from RNA-seq data
  ☆13Updated 3 years ago
• MSKCC-Epi-Bio / gnomeR
  Package to wrangle and visualize genomic data in R
  ☆26Updated 3 months ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated 2 weeks ago