Alternatives and similar repositories for deNovo-Detect:

Users that are interested in deNovo-Detect are comparing it to the libraries listed below

• asoltis / MutEnricher
  Somatic coding and non-coding mutation enrichment analysis for tumor WGS data
  ☆10Updated 3 years ago
• timplab / nanoNOMe
  nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis
  ☆18Updated 2 years ago
• cortes-ciriano-lab / ReConPlot
  ☆21Updated 2 months ago
• XiDsLab / TAGET
  ☆17Updated 2 years ago
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆12Updated 5 years ago
• smithlabcode / abismal
  Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
  ☆17Updated 3 months ago
• nghiavtr / FuSeq_WES
  ☆10Updated last year
• gimelbrantlab / Qllelic
  Enabling differential allele-specific analysis
  ☆11Updated last month
• Xinglab / rMATS-long
  ☆27Updated 2 months ago
• deWitLab / GENOVA
  GENome Organisation Visual Analytics
  ☆15Updated 3 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 3 years ago
• LappalainenLab / lorals
  ☆33Updated last year
• LappalainenLab / lorals_paper_code
  ☆24Updated 2 years ago
• novoalab / Nano3P_Seq
  Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)
  ☆12Updated last year
• AmpliconSuite / CoRAL
  Reconstruction of focal amplifications with long reads
  ☆18Updated this week
• homeveg / nuctools
  software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data
  ☆16Updated 5 years ago
• SziKayLeung / Whole_Transcriptome_Paper
  ☆17Updated 10 months ago
• Aufiero / circRNAprofiler
  ☆10Updated 3 months ago
• mskilab-org / nf-jabba
  ☆13Updated 7 months ago
• scoutzxb / CscoreTool
  ☆20Updated 4 years ago
• gimelbrantlab / ASEReadCounter_star
  Preprocessing sequencing data for allele-specific analysis
  ☆11Updated 3 years ago
• julienrichardalbert / MEA
  ☆9Updated 4 years ago
• czc / nb_distribution
  novoBreak: local assembly for breakpoint detection in cancer genomes
  ☆26Updated 6 years ago
• plantformatics / Socrates
  ☆21Updated 8 months ago
• gagneurlab / splicemap
  ☆19Updated 4 months ago
• YangLab / RADAR
  RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.
  ☆18Updated last year
• gxiaolab / REDITs
  RNA editing tests
  ☆16Updated 4 years ago
• DyogenIBENS / FINSURF
  FINSURF is a tool designed to analyse lists of sequences variants in the human genome.
  ☆12Updated 2 years ago
• broadinstitute / longbow
  Annotation and segmentation of MAS-seq data
  ☆20Updated last year
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆34Updated 7 months ago