☆160May 18, 2026Updated 5 months ago
Alternatives and similar repositories for ProteinEBM
Users that are interested in ProteinEBM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Potts model-based protein sequence design☆120Jul 1, 2026Updated 4 months ago
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 7 months ago
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆466Oct 22, 2026Updated last week
- A generalized computational framework for biomolecular modeling.☆460Oct 22, 2026Updated last week
- ☆192Jul 24, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆87Jun 10, 2026Updated 4 months ago
- composite-objective protein design☆380Updated this week
- Sidechain conditioning and modeling for full-atom protein sequence design☆150Nov 11, 2025Updated 11 months ago
- TMol - Rosetta on the GPU☆117Updated this week
- ☆111Oct 28, 2026Updated last week
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆140Oct 12, 2026Updated 3 weeks ago
- mosaic webapp☆13Apr 2, 2026Updated 7 months ago
- ☆261Sep 22, 2026Updated last month
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆286Jan 3, 2026Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆149Jun 16, 2026Updated 4 months ago
- ☆25Sep 25, 2026Updated last month
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆96Jun 1, 2026Updated 5 months ago
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- Code for "Calibrating Generative Models" by Henry Smith, Nathaniel Diamant, and Brian Trippe☆51Aug 8, 2026Updated 2 months ago
- Model for predicting micro-millisecond motions from protein sequence and/or structure☆118Aug 20, 2026Updated 2 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆547Mar 22, 2026Updated 7 months ago
- ☆24Aug 6, 2026Updated 2 months ago
- User friendly and accurate binder design pipeline☆1,261Sep 21, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 9 months ago
- An Open-source Drug Discovery Engine☆525Oct 8, 2026Updated 3 weeks ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆56Jun 22, 2026Updated 4 months ago
- An open-source Rust implementation of Shape Complementarity (SC)☆20Oct 2, 2025Updated last year
- A unified framework for making structural biology tools interoperable.☆154Updated this week
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆224May 13, 2026Updated 5 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆76Aug 11, 2026Updated 2 months ago
- Inference code for RFdiffusion2☆454Oct 22, 2026Updated last week
- Tokenizing Loops of Antibodies☆38Nov 23, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆24Dec 14, 2025Updated 10 months ago
- Framework for modified sampling from biomolecular generative models☆29Updated this week
- ☆37Dec 6, 2025Updated 10 months ago
- Metadiffusion implemented in Boltz-2☆25Feb 23, 2026Updated 8 months ago
- protein folding app running on modal☆39May 30, 2026Updated 5 months ago
- Towards a protein binder candidate for every protein☆43Sep 1, 2026Updated 2 months ago
- Miniprotein and antibody design pipeline for ESMFold2☆48Sep 23, 2026Updated last month