oxpig / kasearch
KA-Search: Rapid and exhaustive sequence identity search of known antibodies
☆22Updated 9 months ago
Alternatives and similar repositories for kasearch:
Users that are interested in kasearch are comparing it to the libraries listed below
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆25Updated 9 months ago
- ☆27Updated 2 years ago
- Making Protein folding accessible to all!☆22Updated last year
- Extension of ThermoMPNN for double mutant predictions☆32Updated last month
- Kuhlman Lab Installation of AlphaFold3☆25Updated 3 weeks ago
- ☆26Updated 2 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆36Updated 2 years ago
- ☆22Updated 2 weeks ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆28Updated 10 months ago
- ☆35Updated last year
- ☆43Updated 7 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- ☆59Updated last year
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆30Updated last month
- Repo contains source code of the SurfaceID paper☆22Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆39Updated 4 months ago
- An antibody-specific language model focusing on NGL prediction☆26Updated 7 months ago
- Tool for modelling the CDRs of antibodies☆32Updated 2 years ago
- Code for humanization of antibody and nanobody☆39Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆46Updated 4 months ago
- Tool for modelling the CDRs of antibodies☆47Updated 2 years ago
- ☆18Updated 5 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- Efficient manipulation of protein structures in Python☆53Updated 5 months ago
- ☆81Updated 6 months ago
- ☆32Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆54Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆46Updated 5 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 5 months ago