DeepECtransformer
☆30Oct 20, 2023Updated 2 years ago
Alternatives and similar repositories for DeepProZyme
Users that are interested in DeepProZyme are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Dual-core Multi-agent Learning Framework For EC Number Prediction☆21Nov 5, 2024Updated last year
- ☆52Aug 13, 2025Updated 10 months ago
- ☆18Jun 1, 2026Updated 2 weeks ago
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆12Mar 3, 2025Updated last year
- Tools for working with agp files☆19Jun 26, 2025Updated 11 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆15Sep 9, 2024Updated last year
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆314Apr 6, 2025Updated last year
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆15Nov 17, 2022Updated 3 years ago
- A multiscale pangenome browser☆30Apr 24, 2026Updated last month
- Implementation of Krona to QIIME2☆16Mar 14, 2024Updated 2 years ago
- Tool to flag foldback and chimeric artifacts in long-read sequence alignment files☆41Apr 28, 2026Updated last month
- ☆17Jun 15, 2022Updated 4 years ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- a python package for automated generation of phylogenetic trees from genbank files☆23Apr 9, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A predictor of enzyme optimal temperature☆16Mar 13, 2025Updated last year
- NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction☆26Jun 21, 2023Updated 2 years ago
- tree-aggregated compositional analysis for high-throughput sequencing data☆11Aug 24, 2022Updated 3 years ago
- Serializing molecule 3D structures☆14Nov 27, 2024Updated last year
- Sketch phylogenetic trees and networks☆26Jun 11, 2026Updated last week
- Protein function prediction using protein structures and deep graph neural networks.☆22Jan 24, 2025Updated last year
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆66Sep 30, 2020Updated 5 years ago
- Percentile-normalization method for correcting batch effects in case-control studies☆12Oct 26, 2019Updated 6 years ago
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆24Jan 28, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆16May 10, 2022Updated 4 years ago
- Independent evaluation set construction for trustworthy ML models in biochemistry☆15Jun 2, 2026Updated 2 weeks ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆70Mar 16, 2026Updated 3 months ago
- PaperBLAST: find papers about a protein or its homologs☆53Updated this week
- Code for the antibody deep learning paper.☆16Feb 28, 2022Updated 4 years ago
- refineGEMs is a python package inteded to help with the curation of genome-scale metabolic models (GEMS).☆20Updated this week
- Machine learning prediction of enzyme optimum pH☆55Apr 29, 2025Updated last year
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- Code to generate re-assemblies of the Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)☆23Apr 14, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- EnzyMM - Enzyme Motif Miner - Geometric matching of catalytic motifs in protein structures.☆41May 23, 2026Updated 3 weeks ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆46Feb 17, 2023Updated 3 years ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆179Apr 6, 2026Updated 2 months ago
- Scripts for calculating features and regression of prokaryote OGT☆25Feb 13, 2024Updated 2 years ago
- Ms2 basEd saMple vectOrization (memo) package☆17Jun 13, 2023Updated 3 years ago
- Graph Learning of INTER-protein contacts☆10Feb 20, 2022Updated 4 years ago
- interactive phylogenetic tree viewer☆11Jun 26, 2024Updated last year