DeepECtransformer
☆33Oct 20, 2023Updated 3 years ago
Alternatives and similar repositories for DeepProZyme
Users that are interested in DeepProZyme are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆334Apr 6, 2025Updated last year
- ☆11Jul 25, 2024Updated 2 years ago
- ☆16May 10, 2022Updated 4 years ago
- A Python package to predict enzyme catalytic optimum temperature with machine learning☆10Feb 9, 2021Updated 5 years ago
- ☆57Aug 13, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Jun 3, 2025Updated last year
- Dual-core Multi-agent Learning Framework For EC Number Prediction☆22Jul 23, 2026Updated 3 months ago
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- ☆13Sep 17, 2025Updated last year
- Sequence-based protein solubility prediction using multidimensional embedding☆12Apr 19, 2021Updated 5 years ago
- refineGEMs is a python package inteded to help with the curation of genome-scale metabolic models (GEMS).☆22Updated this week
- Protein function prediction using protein structures and deep graph neural networks.☆23Jan 24, 2025Updated last year
- Predictive Algorithm for Resolving A-domain Specificity by featurising Enzyme and Compound in Tandem☆14Oct 15, 2026Updated 3 weeks ago
- ☆20Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆36Jul 28, 2021Updated 5 years ago
- ☆15May 28, 2025Updated last year
- BRENDA parser in python☆23May 16, 2022Updated 4 years ago
- symbiont classifier☆25Sep 21, 2026Updated last month
- Feature map and function annotation of Proteins☆35Jun 13, 2024Updated 2 years ago
- Deep Residual Learning for Molecular Force Fields☆13Aug 12, 2026Updated 2 months ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆73Mar 16, 2026Updated 7 months ago
- Apply AI-based trait prediction from BacDive to your own genomes.☆16Nov 12, 2024Updated last year
- Implementation of Krona to QIIME2☆16Mar 14, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆17Sep 9, 2024Updated 2 years ago
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆15Nov 17, 2022Updated 3 years ago
- ☆17Jun 15, 2022Updated 4 years ago
- ☆37Dec 6, 2023Updated 2 years ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Mar 21, 2020Updated 6 years ago
- a python package for automated generation of phylogenetic trees from genbank files☆24Apr 9, 2026Updated 6 months ago
- Machine learning prediction of enzyme optimum pH☆58Apr 29, 2025Updated last year
- A filter algorithm with program to filter an alignment or mapping file☆13May 15, 2025Updated last year
- Updates and maintenance of the Cohesion method for quantifying connectivity in microbial communities☆10May 9, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Serializing molecule 3D structures☆14Nov 27, 2024Updated last year
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated 2 years ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated 2 years ago
- ModelPolisher accesses the BiGG Models knowledgebase to annotate SBML models.☆24Jan 28, 2025Updated last year
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆45Jul 27, 2024Updated 2 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated 2 years ago
- CLI tool to annotate genes with KOfam☆108Oct 17, 2026Updated 2 weeks ago