prehensilecode / alphafold_singularityLinks
Singularity recipe for AlphaFold
☆36Updated last year
Alternatives and similar repositories for alphafold_singularity
Users that are interested in alphafold_singularity are comparing it to the libraries listed below
Sorting:
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆64Updated 4 months ago
- Evolutionary conservation estimation of residues or nucleotides☆54Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆70Updated 2 years ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- A domain parser for Alphafold models☆43Updated last year
- Feature map and function annotation of Proteins☆34Updated last year
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆107Updated 3 months ago
- PSIPRED Protein Secondary Structure Predictor☆58Updated 5 months ago
- Install alphafold on the local machine, get out of docker.☆103Updated 4 years ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆110Updated 2 weeks ago
- Evolutionary velocity with protein language models☆94Updated last week
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 3 months ago
- ColabFold protocol☆57Updated last year
- MMseqs2 app to run on your workstation or servers☆99Updated last month
- ☆37Updated 5 months ago
- ☆44Updated last year
- ☆31Updated 3 years ago
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- Conservation analysis of homologous proteins with Python☆12Updated 4 years ago
- Transmembrane proteins predicted through Language Model embeddings☆42Updated 4 months ago
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆82Updated 9 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated 2 weeks ago
- ☆33Updated last year
- ☆85Updated 3 weeks ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆120Updated last year
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆76Updated 3 months ago