prehensilecode / alphafold_singularityLinks
Singularity recipe for AlphaFold
☆36Updated 9 months ago
Alternatives and similar repositories for alphafold_singularity
Users that are interested in alphafold_singularity are comparing it to the libraries listed below
Sorting:
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- PSIPRED Protein Secondary Structure Predictor☆57Updated last month
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated last month
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆58Updated 4 months ago
- Mutation effects predicted from sequence co-variation☆68Updated 7 years ago
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆63Updated last year
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- Evolutionary velocity with protein language models☆94Updated last year
- A domain parser for Alphafold models☆40Updated last year
- ☆85Updated last year
- MMseqs2 app to run on your workstation or servers☆92Updated this week
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆101Updated last month
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆104Updated 4 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆49Updated last week
- Install alphafold on the local machine, get out of docker.☆103Updated 3 years ago
- ☆21Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Direct coupling analysis software for protein and RNA sequences☆52Updated last month
- Automatic oligonucleotide design for PCR-based gene synthesis☆47Updated 6 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 8 months ago
- Feature map and function annotation of Proteins☆33Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆108Updated last year
- Inference of couplings in proteins and RNAs from sequence variation☆112Updated 2 years ago
- ☆51Updated 2 weeks ago
- DeepAlign: the protein structure analysis toolkit☆40Updated 5 years ago
- Fast protein structure searching or your money back☆111Updated 4 months ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆17Updated 6 years ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago