scripts and facilities for in-silico mutagenesis with FoldX
☆67Mar 9, 2026Updated last week
Alternatives and similar repositories for mutatex
Users that are interested in mutatex are comparing it to the libraries listed below
Sorting:
- Prediction of Protein-Small molecule binding affinities☆21Oct 1, 2025Updated 5 months ago
- ☆85Nov 25, 2025Updated 3 months ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Mar 29, 2021Updated 4 years ago
- the MAVISp database for annotations and predictions of variant effects at the protein level☆13Feb 19, 2026Updated last month
- Protocols and tools to run (automated) atomistic simulations of enzyme-ligand systems☆21Oct 11, 2021Updated 4 years ago
- predict stability change upon mutation☆30Jun 28, 2024Updated last year
- pyFoldX: python bindings for FoldX.☆55Aug 16, 2021Updated 4 years ago
- Modeling the effects of mutations in proteins using PyRosetta☆27Jan 26, 2018Updated 8 years ago
- ☆11Mar 28, 2024Updated last year
- ☆145Aug 17, 2022Updated 3 years ago
- Binding pocket optimization based on force fields and docking scoring functions☆37Mar 19, 2025Updated last year
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Mar 21, 2024Updated last year
- ☆74Feb 13, 2026Updated last month
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆119Dec 20, 2023Updated 2 years ago
- Lightweight induced fit docking☆21May 22, 2023Updated 2 years ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆180Oct 10, 2019Updated 6 years ago
- Tools for molecular Docking☆27Jul 24, 2025Updated 7 months ago
- ☆11Sep 2, 2024Updated last year
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆28May 26, 2025Updated 9 months ago
- ☆21May 15, 2025Updated 10 months ago
- SE(3)-equivariant point cloud networks for virtual screening☆24Apr 29, 2023Updated 2 years ago
- ☆56Feb 16, 2026Updated last month
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Nov 18, 2023Updated 2 years ago
- protein docking stuff☆52Sep 2, 2024Updated last year
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15May 24, 2018Updated 7 years ago
- Universal framework for physically based computational protein design☆37Aug 19, 2023Updated 2 years ago
- PyDock Tutorial☆35Jul 2, 2018Updated 7 years ago
- Analysis and design of protein-protein or protein-peptide interactions based on atlas database.☆15Sep 27, 2022Updated 3 years ago
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆675Feb 27, 2026Updated 2 weeks ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated last year
- ☆35Sep 21, 2023Updated 2 years ago
- PROPKA predicts the pKa values of ionizable groups in proteins and protein-ligand complexes based in the 3D structure.☆339Feb 25, 2026Updated 3 weeks ago
- [ICLR 2023] "HotProtein: A Novel Framework for Protein Thermostability Prediction and Editing" by Tianlong Chen*, Chengyue Gong*, Daniel …☆32Mar 19, 2023Updated 3 years ago
- LMetalSite: alignment-free metal ion-binding site prediction from protein sequence through pretrained language model and multi-task learn…☆19Oct 23, 2025Updated 4 months ago
- Some Rosetta Scripts that allow for various simple tasks☆15Jan 27, 2020Updated 6 years ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- WaterDock-2.0 implementation with Akshay Sridhar☆21Nov 2, 2023Updated 2 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆229Aug 7, 2025Updated 7 months ago