Alternatives and similar repositories for nest_vnn:

Users that are interested in nest_vnn are comparing it to the libraries listed below

• altoslabs / perturbench
  ☆25Updated 3 months ago
• krishnanlab / obnb
  A Python toolkit for setting up benchmarking dataset using biomedical networks
  ☆22Updated 3 weeks ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆36Updated 2 years ago
• biomed-AI / GraphSCI
  Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks
  ☆19Updated 10 months ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated 2 weeks ago
• KlugerLab / ALRA-paper
  ☆9Updated 3 years ago
• hemberg-lab / sc3s
  Single Cell Consensus Clustering with Speed
  ☆21Updated 2 years ago
• jlakkis / CarDEC
  ☆19Updated 3 years ago
• marcottelab / protein_complex_maps
  Kdrew's scripts for handling protein complex map data
  ☆14Updated last year
• davidbuterez / CellVGAE
  An unsupervised scRNA-seq analysis workflow with graph attention networks
  ☆24Updated last year
• Center-for-Health-Data-Science / multiDGD
  ☆24Updated 3 months ago
• bozdaglab / SUPREME
  SUPREME: A GCN based approach for cancer subtype prediction
  ☆18Updated last year
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆62Updated last year
• theislab / geome
  ☆16Updated 9 months ago
• hart-lab / drugz
  DRUGZ software
  ☆23Updated 3 years ago
• JialongJiang / DSPIN
  Code and example of the D-SPIN framework
  ☆21Updated this week
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆20Updated last month
• Teichlab / celcomen
  ☆12Updated last month
• lanagarmire / Single-cell-drug-repositioning
  ☆15Updated 9 months ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 2 years ago
• mhorlacher / rbpnet
  ☆18Updated last year
• DabinJeong / GOAT_multi-omics_biomarker
  Multi-omics biomarker discovery tool exploiting a gene-gene interaction network
  ☆16Updated last year
• cole-trapnell-lab / sci-plex
  repository containing analysis scripts and auxiliary files
  ☆33Updated 5 years ago
• xiaoyeye / GCNG
  using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions
  ☆56Updated 3 years ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• cailab-tamu / scTenifoldNet
  A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
  ☆23Updated 3 months ago
• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• carpenter-singh-lab / 2022_Haghighi_NatureMethods
  High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
  ☆48Updated 2 months ago
• krishnanlab / PyGenePlexus
  A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…
  ☆20Updated last week
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year