SUPREME: A GCN based approach for cancer subtype prediction
☆18Aug 9, 2023Updated 2 years ago
Alternatives and similar repositories for SUPREME
Users that are interested in SUPREME are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆20Nov 10, 2025Updated 4 months ago
- ☆15Apr 2, 2023Updated 2 years ago
- Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis☆11May 1, 2023Updated 2 years ago
- VAE package for reproducible generative models of biological data☆13Nov 28, 2024Updated last year
- A deep-learning framework for multi-omics integration☆32Jul 6, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Jan 30, 2023Updated 3 years ago
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆12Dec 9, 2020Updated 5 years ago
- Machine Learning predictions of cancer cell sensitivity to different drugs using data from CCLE (Cancer Cell Line Encyclopedia).☆15Feb 6, 2017Updated 9 years ago
- ☆10Dec 17, 2025Updated 3 months ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆13Mar 23, 2024Updated 2 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆11May 31, 2024Updated last year
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines☆17Apr 3, 2023Updated 2 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Antibody-Specific Epitope Mapping☆17Sep 10, 2025Updated 6 months ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 5 months ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated 10 months ago
- Python package to perform normalization and variance-stabilization of single-cell data☆28Jul 17, 2025Updated 8 months ago
- GWAS genetics Fine-mapping method☆17May 17, 2024Updated last year
- ☆17May 5, 2020Updated 5 years ago
- A GWAS course☆12Nov 4, 2021Updated 4 years ago
- Explainable Multilayer Graph Neural Network for Cancer Gene Prediction☆21Nov 3, 2023Updated 2 years ago
- A deep learning framework for cervical cancer detection to allow improved accuracy for PAP smear test results☆19Jan 18, 2020Updated 6 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- cEll tyPe enrIChment☆16Dec 11, 2022Updated 3 years ago
- An automated workflow to create disease-specific Knowledge Graphs☆22Updated this week
- 🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.☆12Jan 17, 2021Updated 5 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆32Mar 13, 2025Updated last year
- Coputer-assisted liver surgery.☆24Nov 8, 2022Updated 3 years ago
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆38Oct 2, 2019Updated 6 years ago
- Define regions in the genome☆33Mar 3, 2022Updated 4 years ago
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Sep 7, 2022Updated 3 years ago
- development of network co-localization tool☆14Mar 2, 2026Updated 3 weeks ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 4 years ago
- ☆11Jul 18, 2025Updated 8 months ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Oct 16, 2019Updated 6 years ago
- Workshop (2-6 hours): cleaning, missing value imputation, EDA, ensemble learning, calibration, variable importance ranking, accumulated l…☆14Jun 20, 2020Updated 5 years ago
- Bayesian network modelling of mutational interactions identifies novel cancer subgroups☆15May 10, 2021Updated 4 years ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Apr 30, 2024Updated last year
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago