QuackenbushLab / yarnLinks
YARN: Robust Multi-Tissue RNA-Seq Preprocessing and Normalization
☆13Updated last year
Alternatives and similar repositories for yarn
Users that are interested in yarn are comparing it to the libraries listed below
Sorting:
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 6 years ago
- kallisto index tag extractor☆20Updated 5 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆44Updated 4 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- post-clustering differential expression test☆35Updated 6 years ago
- Differential Correlation across Ranked Samples☆12Updated 2 years ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- ☆54Updated 3 months ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 9 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- ☆19Updated 7 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Clone identification from single-cell data☆62Updated 2 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- ☆28Updated 6 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 6 years ago
- ☆37Updated 8 years ago
- ☆62Updated 2 months ago
- Collection of useful methods for single cell analysis☆14Updated 9 months ago
- Toolkit for Single-Cell Velocity☆56Updated 5 months ago
- An R package to construct Elastic Principal Graphs☆22Updated 5 years ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- Identify and correct invalid gene symbols☆58Updated 6 months ago
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 7 years ago
- Workshop for CNV analysis with Bioconductor☆17Updated 5 months ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year