YARN: Robust Multi-Tissue RNA-Seq Preprocessing and Normalization
☆13Mar 4, 2024Updated last year
Alternatives and similar repositories for yarn
Users that are interested in yarn are comparing it to the libraries listed below
Sorting:
- COmplex Network Description Of Regulators, an R package for bipartite network analysis☆12Jul 5, 2019Updated 6 years ago
- ☆12Jul 30, 2022Updated 3 years ago
- manifold metric and correction techniques for (Bayesian) GPLVM from GPy☆12Mar 1, 2020Updated 6 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 2 years ago
- Shape analysis of high-throughput data☆19Feb 24, 2016Updated 10 years ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Apr 14, 2019Updated 6 years ago
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 2 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Nov 5, 2022Updated 3 years ago
- An analytics package for single cell data☆22May 18, 2022Updated 3 years ago
- R vignettes/pkgdown for elementary statistics for a summer course☆14Jan 9, 2025Updated last year
- Modeling and correcting fragment sequence bias for RNA-seq☆24Jun 4, 2024Updated last year
- Transcript quantification import with automatic metadata detection☆69Feb 3, 2026Updated 3 weeks ago
- ☆38Jul 26, 2016Updated 9 years ago
- R API and htmlwidget for Vitessce☆44Aug 13, 2025Updated 6 months ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Mar 15, 2023Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Jun 17, 2025Updated 8 months ago
- An introduction to matrix factorization and PCA and SVD.☆41Sep 28, 2023Updated 2 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- ☆10May 17, 2017Updated 8 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Slides for the RSS International Conference 2023 workshop on data visualisation.☆10Aug 11, 2024Updated last year
- S3proxy provides a simple REST-interface to files and keys stored on the AWS S3 service.☆13Apr 2, 2014Updated 11 years ago
- R as a backend for web apps.☆10Mar 7, 2018Updated 7 years ago
- Simulation and power calculations for time-to-event trials☆18May 21, 2020Updated 5 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆41Apr 26, 2024Updated last year
- a graph layout js library depended on ogdf and emscripten☆11Dec 7, 2021Updated 4 years ago
- Playing with the API for ClinicalTrials.gov and LillyCOI☆14Jul 28, 2014Updated 11 years ago
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆21Feb 2, 2026Updated 3 weeks ago
- Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.☆11Apr 13, 2024Updated last year
- Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.☆11May 24, 2024Updated last year
- Materials accompanying the upstrap paper☆12Oct 19, 2020Updated 5 years ago
- ☆11Sep 5, 2018Updated 7 years ago
- COMUNET: a tool to explore and visualize intercellular communication☆12Apr 15, 2020Updated 5 years ago
- The Bioconductor Build System☆12Feb 6, 2026Updated 3 weeks ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 10 years ago
- Python bindings for WDL☆10Nov 9, 2017Updated 8 years ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- Sparse matrix format with data on disk☆10Sep 6, 2024Updated last year