Alternatives and similar repositories for Intro-to-variant-analysis

Users that are interested in Intro-to-variant-analysis are comparing it to the libraries listed below

• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆66Updated last year
• NBISweden / GUESSmyLT
  An efficient way to guess the library type of your RNA-Seq data.
  ☆33Updated 3 years ago
• raynamharris / Shell_Intro_for_Bioinformatics_STG
  Intro to Shell for Bioinformatics - with STG examples
  ☆28Updated 9 years ago
• nf-core / rnasplice
  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
  ☆63Updated 7 months ago
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆35Updated 5 months ago
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆70Updated last month
• 123xiaochen / VCFshiny
  ☆29Updated last year
• js2264 / tidyCoverage
  ☆23Updated last week
• crazyhottommy / pyflow-RNAseq
  RNAseq pipeline based on snakemake
  ☆26Updated 2 years ago
• hbctraining / Intro-to-rnaseq-hpc-salmon
  ☆50Updated 4 years ago
• dariober / bioinformatics-cafe
  Unsorted scripts for bioinformatics
  ☆61Updated 4 years ago
• genepi / nf-gwas
  A nextflow pipeline to perform state-of-the-art genome-wide association studies.
  ☆77Updated 3 months ago
• snakemake-workflows / rna-seq-kallisto-sleuth
  A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
  ☆68Updated last week
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• bartongroup / RATS
  Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
  ☆34Updated 3 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆54Updated last week
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 6 years ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆37Updated last year
• nf-core / lncpipe
  UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
  ☆34Updated 9 months ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 6 years ago
• ShiLab-Bioinformatics / subread
  The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…
  ☆52Updated 2 years ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆38Updated 3 years ago
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆55Updated 2 years ago
• kundajelab / phantompeakqualtools
  This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…
  ☆61Updated 5 years ago
• mritchielab / long_read_tools
  A catalogue of available long read sequencing data analysis tools
  ☆83Updated 2 weeks ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• amarinderthind / RNA-seq-tutorial-for-gene-differential-expression-analysis
  This RNAseq data analysis tutorial is created for educational purpose
  ☆34Updated 3 months ago
• BioinfoUNIBA / QEdit
  RNA editing quantification in deep transcriptome data
  ☆16Updated 6 months ago
• ISUgenomics / common_analyses
  Repository of common bioinformatics scripts
  ☆39Updated 4 years ago