Candidate Drivers Analysis: Multi-Omic Search for Candidate Drivers of Functional Signatures
☆24Oct 13, 2025Updated 9 months ago
Alternatives and similar repositories for CaDrA
Users that are interested in CaDrA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆23May 4, 2026Updated 2 months ago
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆16Apr 15, 2025Updated last year
- A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis☆21Feb 14, 2024Updated 2 years ago
- R package for plotting 3D graphical visualization of multi-omics data.☆27Mar 16, 2022Updated 4 years ago
- Toolbox package for organizing and working with TCGA data☆31Jul 2, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Differential analysis of multi-omics data based on the Tweedie distribution☆31May 7, 2026Updated 2 months ago
- OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …☆35Jul 21, 2026Updated last week
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- Shareable project for: Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States☆10Nov 11, 2020Updated 5 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆27Mar 3, 2020Updated 6 years ago
- code implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution☆10Jan 31, 2020Updated 6 years ago
- Research project☆27Dec 18, 2021Updated 4 years ago
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆69Jun 4, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- ☆18Oct 25, 2014Updated 11 years ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jul 6, 2026Updated 3 weeks ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆36Updated this week
- Generate signature matrix from single cell data.☆12Apr 13, 2021Updated 5 years ago
- MAVIS: Meta Analysis via Shiny☆36Mar 1, 2018Updated 8 years ago
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆14May 27, 2025Updated last year
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- XEnograft Visualization & Analysis☆11Oct 18, 2025Updated 9 months ago
- Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage☆12Aug 13, 2020Updated 5 years ago
- Introduction to large scale computing and data wrangling with hands-on tutorials☆16Mar 13, 2026Updated 4 months ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆21Feb 26, 2021Updated 5 years ago
- Project bulk/single-cell RNA-seq data to given LSI space☆12Jan 17, 2022Updated 4 years ago
- Enhancements and Utilities for the gt Package☆20Updated this week
- GNU Unifont hex fonts☆10May 9, 2026Updated 2 months ago
- Cute things for ggplot2.☆29May 14, 2020Updated 6 years ago
- R package to analyze large-scale pharmacogenomic datasets.☆70May 26, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Machine learning workshop materials☆16Nov 19, 2024Updated last year
- ☆36May 28, 2026Updated 2 months ago
- cyclone☆19Jul 21, 2015Updated 11 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- intuitive software for advanced meta-analysis☆46Jul 28, 2020Updated 6 years ago
- CoMEt: A Statistical Approach to Identify Combinations of Mutually Exclusive Alterations in Cancer☆20Jan 21, 2019Updated 7 years ago