fredhutchio / ml-pancancer-exampleView external linksLinks
☆18Mar 14, 2021Updated 4 years ago
Alternatives and similar repositories for ml-pancancer-example
Users that are interested in ml-pancancer-example are comparing it to the libraries listed below
Sorting:
- Materials for KDD2023 tutorial: Knowledge-augmented Graph Machine Learning for Drug Discovery: from Precision to Interpretability☆23Aug 8, 2023Updated 2 years ago
- ☆35May 19, 2025Updated 8 months ago
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated last year
- Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data☆11Dec 10, 2021Updated 4 years ago
- Examples for gget (https://github.com/pachterlab/gget).☆39Sep 13, 2025Updated 5 months ago
- Website for the 2021-2022 Caltech class Bi/BE/CS 183: Introduction to Computational Biology and Bioinformatics☆10Mar 11, 2022Updated 3 years ago
- Population Genomics in R workshop☆12Mar 24, 2024Updated last year
- ☆12Jan 9, 2023Updated 3 years ago
- Code required to reproduce the analysis made in Kiviaho et al. 2024☆12Nov 29, 2024Updated last year
- EPIDEMIC is an easy-to-run Matlab/Octave educational toolkit for epidemiological analysis.☆16Apr 4, 2025Updated 10 months ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline☆12Jul 6, 2023Updated 2 years ago
- Machine Learning for Genomics Course.☆18Feb 15, 2023Updated 3 years ago
- A DIY Guide To BLAST Tools For Sequence Alignment☆16Aug 9, 2024Updated last year
- Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.☆15May 9, 2019Updated 6 years ago
- ☆12Feb 12, 2024Updated 2 years ago
- Transformer for End to End Molecule Property Prediction☆11Jun 1, 2022Updated 3 years ago
- ☆10Mar 19, 2024Updated last year
- Library for calculating codon and codon pair conservation rates across species of a given genus☆13Jan 14, 2026Updated last month
- ☆13Nov 1, 2023Updated 2 years ago
- Course material for MF9130E☆17Apr 24, 2024Updated last year
- NeuThera is a modular drug discovery starter toolkit, integrating multiple state-of-the-art generative molecular design models such as Ta…☆20Nov 8, 2025Updated 3 months ago
- spatially aware scalable and accurate tool for spot deconvolution and clustering in spatial transcriptomics☆14Aug 12, 2024Updated last year
- ChatGPDB Service☆12Mar 30, 2023Updated 2 years ago
- This repo is mainly for beginners to intermediate level ML/Bioiniformatics engineers/students/enthusiasts. It mainly focus on creating a …☆15Dec 28, 2024Updated last year
- Code for fuzzy monkeys.☆15Apr 29, 2025Updated 9 months ago
- A machine learning framework to predict antibiotic resistance traits and yet unknown genes underlying resistance to specific antibiotics …☆15Oct 6, 2022Updated 3 years ago
- Bioinformatics workflow that identifies mutational overlaps using data from the 1000 genomes project☆14Jul 30, 2024Updated last year
- Here I show how to use Convolutional Neural Networks (CNNs) for Ancient DNA analysis☆15Apr 24, 2019Updated 6 years ago
- Building and analyzing residue interaction networks with cofactors (includes tutorial).☆18Mar 31, 2021Updated 4 years ago
- Introduction to Ancient Metagenomics Book☆15Nov 27, 2025Updated 2 months ago
- ☆18Mar 24, 2025Updated 10 months ago
- A short tutorial to using DL and keras for genomics with sequence data.☆15Dec 3, 2020Updated 5 years ago
- ☆17Oct 23, 2023Updated 2 years ago
- ☆18Feb 24, 2023Updated 2 years ago
- ☆13Oct 12, 2020Updated 5 years ago
- Time-series Aware Precision and Recall for Evaluating Anomaly Detection Methods☆17Dec 21, 2021Updated 4 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆23Aug 9, 2023Updated 2 years ago