molgenis / capiceLinks
☆27Updated 11 months ago
Alternatives and similar repositories for capice
Users that are interested in capice are comparing it to the libraries listed below
Sorting:
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆55Updated this week
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- R package for inferring copy number from read depth☆32Updated 3 years ago
- ⛏ HLA predictions from NGS shotgun data☆55Updated 5 months ago
- visual analysis of your VCF files☆38Updated 2 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Updated 5 months ago
- RNA editing quantification in deep transcriptome data☆15Updated 4 months ago
- Assign gene names to regions in a BED file☆25Updated 2 years ago
- Long read to rMATS☆32Updated 2 years ago
- A software for calculating telomere length☆72Updated 7 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 2 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 9 months ago
- VEP Plugin to annotate high-impact five prime UTR variants☆27Updated last year
- Scripts to run copynumber variation calls on tumor and normal BAM files using Varscan2☆29Updated 7 years ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆28Updated 3 years ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated 4 months ago
- Precision HLA typing from next-generation sequencing data☆73Updated last month
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 7 years ago
- ☆33Updated 3 years ago
- This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination …☆34Updated 2 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆77Updated last month
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆29Updated 4 years ago
- Python program designed to reconstruct immunoglobulin gene rearrangements and oncogenic translocations from WGS, WES and capture NGS in l…☆20Updated 2 years ago
- ☆29Updated 6 years ago