A segmentation toolkit for segment the Nanopore RNA signal.
☆20Feb 18, 2025Updated last year
Alternatives and similar repositories for BoostNano
Users that are interested in BoostNano are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository with all my container recipes 👩🍳☆17Sep 9, 2024Updated last year
- Super-fast and accurate demultiplexing of direct RNA-seq runs.☆20Updated this week
- GPU CRF-CTC decoding for nanopore basecalling☆16Aug 7, 2026Updated last week
- A basecaller for Oxford Nanopore Technologies' sequencers☆121Jul 6, 2023Updated 3 years ago
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Dec 30, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Xron - an omni basecaller for ONT reads.☆24Nov 27, 2024Updated last year
- RNA modifications detection from Nanopore dRNA-Seq data☆88Jun 20, 2026Updated last month
- A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.☆17Apr 21, 2018Updated 8 years ago
- Signal based nanopore RNA demultiplexing with convolutional neural networks☆40Aug 2, 2024Updated 2 years ago
- Nanopore basecalling and consensus decoding☆46Jul 22, 2022Updated 4 years ago
- An `R` package for various phylogenetic and evolutionary biology data manipulations☆12Mar 5, 2018Updated 8 years ago
- Nanopore direct RNA basecaller☆11Oct 27, 2022Updated 3 years ago
- SquiggleKit: A toolkit for manipulating nanopore signal data☆129Feb 16, 2024Updated 2 years ago
- Coronavirus (SARS-Cov-2) sequencing analysis☆10Oct 5, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Detecting methylation using signal-level features from Nanopore sequencing reads☆120Jun 4, 2023Updated 3 years ago
- Animated GIF of flow cell performance from sequencing summary file.☆13Feb 20, 2018Updated 8 years ago
- A versatile sequenced read processor for nanopore direct RNA sequencing☆81May 24, 2020Updated 6 years ago
- A viral haplotype reconstruction tool for long reads.☆17Jun 3, 2026Updated 2 months ago
- Extract modifed base call information from Guppy Fast5 files.☆14Mar 28, 2022Updated 4 years ago
- Fast5 API provided by ONT Research☆21Mar 17, 2022Updated 4 years ago
- Predictive kmer models for development use☆64Jun 6, 2023Updated 3 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- A tool for de novo clustering of long transcriptomic reads☆14Oct 2, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Continuous Wavelet Dynamic Time Warping for unbalanced global mapping of two signals☆20Jan 14, 2019Updated 7 years ago
- Signal-level algorithms for MinION data☆600Aug 5, 2023Updated 3 years ago
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Feb 15, 2022Updated 4 years ago
- A streaming method for mapping nanopore raw signals☆32Nov 7, 2021Updated 4 years ago
- Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group☆94Jan 13, 2022Updated 4 years ago
- ☆16Jul 23, 2026Updated 3 weeks ago
- Flip-flop basecaller for Oxford Nanopore reads☆97Jan 13, 2022Updated 4 years ago
- ☆18Apr 18, 2024Updated 2 years ago
- VBZ compression plugin for nanopore signal data☆44Apr 7, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedo…☆18Sep 1, 2025Updated 11 months ago
- Fast bird catching fishes AKA realtime very high accuracy CPU basecaller for Oxford nanopore reads.☆15Oct 6, 2021Updated 4 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Mar 20, 2025Updated last year
- Read Until client library for Nanopore Sequencing☆108Sep 25, 2024Updated last year
- FISH Iterative Cell Typing☆11Mar 24, 2024Updated 2 years ago
- Bam Read Index - Extract alignments from a bam file by readname☆29Apr 22, 2024Updated 2 years ago