haotianteng / BoostNanoLinks
A segmentation toolkit for segment the Nanopore RNA signal.
☆19Updated 5 months ago
Alternatives and similar repositories for BoostNano
Users that are interested in BoostNano are comparing it to the libraries listed below
Sorting:
- GUI for inspecting POD5 files☆30Updated 7 months ago
- ☆29Updated 2 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- vcfdist: Accurately benchmarking phased variant calls☆83Updated 2 weeks ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆40Updated last week
- Fast5 API provided by ONT Research☆22Updated 3 years ago
- ☆31Updated last year
- NanoReviser: An Error-correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm☆28Updated last year
- De novo construction of isoforms from long-read data☆31Updated last month
- PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores☆73Updated 2 years ago
- Python client library for Guppy☆31Updated 2 years ago
- ☆30Updated last year
- A short analysis of Oxford Nanopore consensus accuracy for bacterial genome assemblies☆59Updated 5 years ago
- lossless nanopore pod5 <=> s/blow5 file conversion☆40Updated last week
- reference-based long read assemblies of bacterial genomes☆50Updated 3 years ago
- A fast tool for hybrid genome assembly of long and short reads☆78Updated 5 years ago
- Nanopore raw signal repeat detection pipeline☆45Updated 2 years ago
- Super-fast and accurate demultiplexing of direct RNA-seq runs.☆16Updated this week
- A simple tool for extracting reads from Oxford Nanopore fast5 files☆26Updated 7 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆102Updated 9 months ago
- A program for assessing the T2T genome continuity☆82Updated 3 weeks ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆58Updated last year
- Scalable long read self-correction and assembly polishing with multiple sequence alignment☆55Updated last year
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated this week
- ☆116Updated last week
- SquiggleKit: A toolkit for manipulating nanopore signal data☆125Updated last year
- A tool for Racon polishing of miniasm assemblies☆76Updated last month
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆102Updated 3 years ago