cannin / snp_plotter
snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.
☆18Updated 11 months ago
Alternatives and similar repositories for snp_plotter:
Users that are interested in snp_plotter are comparing it to the libraries listed below
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆28Updated 5 months ago
- Interactive eQTL visualizations☆13Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 7 months ago
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 10 months ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 4 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 3 months ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- Software for detecting transposable element insertions from next-generation sequencing data☆14Updated 3 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- interactive plots for differential expression analysis☆25Updated this week
- QTL analysis software for high-dimensional data and complex cross designs☆34Updated last month
- A command line tool to compute mapping statistics from a BAM file☆23Updated 2 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆19Updated 7 years ago
- Flexible Bayesian inference of mutational signatures☆33Updated last year
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 5 months ago
- R package to quickly obtain count vectors from indexed bam files☆14Updated 3 years ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 6 years ago
- Integrative analysis of structural variations.☆40Updated last year
- Data management of large-scale whole-genome sequence variant calls (Development version only)☆45Updated last week
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 8 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 5 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆30Updated 4 months ago