guanjue / S3V2_IDEAS_ESMPLinks
S3norm ver2 + IDEAS epigenetic state / master peak list
☆12Updated 2 years ago
Alternatives and similar repositories for S3V2_IDEAS_ESMP
Users that are interested in S3V2_IDEAS_ESMP are comparing it to the libraries listed below
Sorting:
- Code for EpiMap data browser☆14Updated last year
- Mean Alterations Using Discrete Expression☆14Updated last year
- Explore the cancer relevance of your gene list☆52Updated 2 months ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- Decomposition of heterogeneous DNA methylomes☆23Updated last year
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- HOT regions paper☆11Updated 6 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 7 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Model-based tumour subclonal deconvolution using population genetics☆33Updated 2 weeks ago
- scover☆24Updated 2 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 3 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- ☆16Updated 3 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 6 years ago
- Filter and prioritize fusion calls☆20Updated last year
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Updated 4 years ago
- iread☆25Updated 4 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 11 months ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated 2 weeks ago