S3norm ver2 + IDEAS epigenetic state / master peak list
☆12Sep 22, 2023Updated 2 years ago
Alternatives and similar repositories for S3V2_IDEAS_ESMP
Users that are interested in S3V2_IDEAS_ESMP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Dec 12, 2017Updated 8 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- functions and algorithms for single cell RNA-seq analyses☆12Jan 26, 2021Updated 5 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆11Mar 10, 2026Updated 2 weeks ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Comparison of dimensionality reduction methods☆30Mar 24, 2020Updated 6 years ago
- Single-cell Bisulfite Sequencing Data Mapping☆12May 19, 2021Updated 4 years ago
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- Curated list of resources for variant prioritization☆14Nov 18, 2025Updated 4 months ago
- Effector and Perturbation Estimation Engine (EPEE) conducts differential analysis of transcription factor activity from gene expression d…☆16Oct 3, 2019Updated 6 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Oct 31, 2018Updated 7 years ago
- ☆14May 26, 2020Updated 5 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Mar 5, 2019Updated 7 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆11Dec 3, 2023Updated 2 years ago
- R interface to megadepth: BigWig and BAM related utilities☆13Dec 12, 2024Updated last year
- R plots styled with css☆11Nov 10, 2024Updated last year
- ChromDiff program as described in Yen and Kellis, Nature Communications 2015.☆14May 12, 2016Updated 9 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ChIP-seq DC and QC Pipeline☆36Mar 19, 2021Updated 5 years ago
- genomics toolbox that supports both graphical and command-line execution☆15Mar 4, 2026Updated 2 weeks ago
- Interpretable bimodal network for transcription factors binding site prediction☆10Jun 29, 2023Updated 2 years ago
- ☆64Mar 18, 2025Updated last year
- Scripts for processing sci-RNA-seq/sci-ATAC-seq/sci-CAR reads processing☆15Dec 12, 2018Updated 7 years ago
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated last year
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆41Nov 24, 2022Updated 3 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆47Mar 26, 2025Updated 11 months ago
- Application for semi-automated genomic annotation.☆17Jan 29, 2026Updated last month
- ☆14Jun 24, 2017Updated 8 years ago
- Benchmarking variant calling in polyploids☆15Nov 26, 2021Updated 4 years ago
- ATAC-seq processing pipeline☆34Apr 8, 2022Updated 3 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Nov 11, 2019Updated 6 years ago
- The shiny app that accompanies the ngsReports R package☆13Jun 10, 2021Updated 4 years ago
- ☆20Mar 28, 2017Updated 8 years ago
- ☆21Jul 6, 2023Updated 2 years ago
- ☆10Jan 19, 2019Updated 7 years ago