BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regionsView external linksLinks
HOT regions paper
☆11Jun 18, 2019Updated 6 years ago
Alternatives and similar repositories for HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
Users that are interested in HOT-or-not-examining-the-basis-of-high-occupancy-target-regions are comparing it to the libraries listed below
Sorting:
- Pipeline to find transcription factor footprints in DNase-seq or ATAC-seq datasets☆12Nov 24, 2018Updated 7 years ago
- A repo comparing syntax in R and Python for various tasks. Not comprehensive, but a subset of lines to get one started☆12Dec 3, 2018Updated 7 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Nov 20, 2018Updated 7 years ago
- ☆16Sep 28, 2022Updated 3 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Dec 3, 2018Updated 7 years ago
- Read HOMER motif analysis output in R.☆17Mar 1, 2018Updated 7 years ago
- command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig☆16May 2, 2020Updated 5 years ago
- Data/analysis repository for "Interrogation of human hematopoiesis..." paper☆20Jul 9, 2019Updated 6 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Nov 22, 2017Updated 8 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Dec 8, 2021Updated 4 years ago
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆22Jun 18, 2021Updated 4 years ago
- GOplot☆23Dec 9, 2016Updated 9 years ago
- Calculation of distance metrics for matrices☆26Mar 1, 2019Updated 6 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Mar 15, 2023Updated 2 years ago
- BiocompR is a R package build upon ggplot2 to improve commonly used plots dedicated to data comparison, dataset exploration and, ultimate…☆18Jan 15, 2025Updated last year
- Small coding tasks that enable you to participate in our development☆34May 28, 2025Updated 8 months ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Jul 22, 2019Updated 6 years ago
- 天津医科大学,本科选修课,《故事中的统计学》课程资料☆33Nov 3, 2025Updated 3 months ago
- Probabilistic Inference of Molecular Evolution☆10Sep 6, 2021Updated 4 years ago
- COMET Single-Cell Marker Detection tool☆32Jun 21, 2022Updated 3 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Sep 24, 2021Updated 4 years ago
- Genomic plot in trellis layout☆43Jan 30, 2026Updated 2 weeks ago
- Website and slides for intro to bioinformatics class at Fred Hutch☆13Jun 4, 2018Updated 7 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Jul 5, 2021Updated 4 years ago
- A Snakefile to parallelize bwa.☆13Oct 25, 2013Updated 12 years ago
- ☆12Sep 19, 2016Updated 9 years ago
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆13Mar 23, 2016Updated 9 years ago
- A DL-based framework for sequence and shape motif identification in the human genome☆11May 26, 2023Updated 2 years ago
- Filters for false-positive mutation calls in NGS☆34Apr 12, 2019Updated 6 years ago
- DeepG4: A deep learning approach to predict active G-quadruplexes☆13May 31, 2022Updated 3 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- Services and guidelines for normalizing drug and other therapy terms☆13Jan 13, 2026Updated last month
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 12 years ago
- ☆10Jan 21, 2023Updated 3 years ago
- Advanced R 1-day course taught at the University of Cambridge☆11Jul 6, 2018Updated 7 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Feb 9, 2021Updated 5 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆47Mar 26, 2025Updated 10 months ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Apr 29, 2020Updated 5 years ago