BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regionsLinks
HOT regions paper
☆11Updated 6 years ago
Alternatives and similar repositories for HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
Users that are interested in HOT-or-not-examining-the-basis-of-high-occupancy-target-regions are comparing it to the libraries listed below
Sorting:
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Updated 5 years ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- R package wrapping bedtools☆44Updated 7 months ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 2 weeks ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆29Updated last year
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 9 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆30Updated 7 months ago
- Read HOMER motif analysis output in R.☆17Updated 7 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 6 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 6 years ago
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆10Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Filter and prioritize fusion calls☆20Updated last year
- ☆16Updated 3 years ago
- An R for fast and flexible DNA methylation analysis☆34Updated 3 weeks ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 2 weeks ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Updated 3 years ago
- ☆17Updated last year