CompEpigen / MeDeComLinks
Decomposition of heterogeneous DNA methylomes
☆23Updated last year
Alternatives and similar repositories for MeDeCom
Users that are interested in MeDeCom are comparing it to the libraries listed below
Sorting:
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated last month
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Updated 3 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 5 years ago
- A Julia package for extracting mutation signatures using topic models☆19Updated 3 years ago
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Updated 2 years ago
- CircRNA testing and ploting R package☆10Updated 5 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 4 years ago
- Evolutionary frequency visualization tool of temporal data☆23Updated 3 years ago
- Pairwise Hierarchical Model☆20Updated 3 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Workshop for CNV analysis with Bioconductor☆17Updated last year
- kallisto index tag extractor☆20Updated 6 years ago
- Code for EpiMap data browser☆14Updated last year
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆20Updated 2 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- R package for visualizing complex and multi-track 1D and 2D genomic data in GenomicRanges framework☆17Updated last year
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 6 years ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 2 months ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- Python function for TMB snake plots☆16Updated 5 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- ☆12Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- ☆10Updated 6 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago