greenelab / phenoplierLinks
PhenoPLIER
☆14Updated last year
Alternatives and similar repositories for phenoplier
Users that are interested in phenoplier are comparing it to the libraries listed below
Sorting:
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Gene Expression Decomposition and Integration☆19Updated 11 months ago
- cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer☆19Updated 2 weeks ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 4 months ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 5 years ago
- epigenome analysis to rank transcription factors☆15Updated 6 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated last year
- Tools for assessing clustering robustness☆28Updated last month
- ☆12Updated 4 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆58Updated 3 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆35Updated 4 months ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated this week
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- Explore the cancer relevance of your gene list☆52Updated last month
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Individual level Differential Expression Analysis for Single cells☆26Updated 3 years ago
- ☆28Updated 2 years ago
- Version 2.1.0 released☆23Updated 6 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Fast motif matching in R☆46Updated last year
- ☆19Updated 4 years ago
- single-cell Nucleosome Methylation Transcription☆15Updated 7 years ago
- ☆11Updated 3 years ago
- Vaeda method for computational doublet annotation☆18Updated last year