Advanced BigQuery examples on genomic data.
☆89Jun 9, 2017Updated 9 years ago
Alternatives and similar repositories for bigquery-examples
Users that are interested in bigquery-examples are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Example Cloud Datalab iPython Notebooks for genomics use cases.☆25Sep 5, 2017Updated 8 years ago
- Examples of how to get started with genomics data in BigQuery in many languages.☆53Jun 9, 2017Updated 9 years ago
- Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting …☆14May 28, 2014Updated 12 years ago
- FDA High-performance Integrated Virtual Environment (HIVE)☆40Jun 12, 2026Updated 3 weeks ago
- Quality control methods for human genomic variants.☆61Sep 1, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Aug 2, 2017Updated 8 years ago
- Vials is a Caleydo Web application for visualizing alternative splicing based on mRNAseq data.☆13Jan 8, 2018Updated 8 years ago
- GCP Variant Transforms☆147May 21, 2026Updated last month
- significance testing over interval overlaps☆30Jul 11, 2020Updated 5 years ago
- A Python wrapper for the bioRxiv API.☆11Aug 18, 2021Updated 4 years ago
- My rstudio::conf 2018 presentation slides☆10Jan 16, 2023Updated 3 years ago
- A tool for phasing and imputing haplotypes in 10k+ low coverage sequencing samples☆10Nov 20, 2020Updated 5 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Sep 27, 2021Updated 4 years ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Dec 13, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Examples of using CloudML with genomic data.☆18May 24, 2019Updated 7 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 7 years ago
- Identify cell types and pathways affected by genetic risk loci.☆37Feb 29, 2024Updated 2 years ago
- Companion repo for ExAC paper, 2015☆33Oct 10, 2016Updated 9 years ago
- Storm Database Explorer - Developing Data Products course project.☆11May 3, 2017Updated 9 years ago
- 🐳 Dockerfiles for bioinformatics tools☆17Jun 3, 2026Updated last month
- Quick Intro to Shiny, R Markdown, & HTML Widgets with Application in Drug Development☆13Jul 20, 2017Updated 8 years ago
- ☆11Jun 26, 2020Updated 6 years ago
- ☆28Mar 15, 2017Updated 9 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Tutorial on using popular tools for learning about population history☆56Jul 18, 2018Updated 7 years ago
- DEPRECATED. See https://github.com/clld/glottolog☆12Nov 23, 2017Updated 8 years ago
- CNV detection tool for targeted NGS panel data☆16Feb 28, 2022Updated 4 years ago
- Heuristic search algorithm for fitting qpGraph models☆11Aug 4, 2022Updated 3 years ago
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- A genotype query interface.☆136Mar 29, 2021Updated 5 years ago
- Open Source implementation of the GA4GH htsget protocol for objects stored in Google Cloud Storage☆25Nov 19, 2019Updated 6 years ago
- Library of snakemake rules.☆13Oct 2, 2018Updated 7 years ago
- a simple lightweight workflow engine for data analysis scripting☆11Sep 5, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- TCGA data acquisition and processing for Project Cognoma☆23Apr 19, 2018Updated 8 years ago
- Toil workflows for common genomic pipelines☆33Oct 3, 2019Updated 6 years ago
- Stupid Simple Structural Variant View☆25Nov 21, 2016Updated 9 years ago
- Examples of using SparklingPandas and Pandas with PySpark☆16Aug 6, 2015Updated 10 years ago
- Sample Level Analysis of Pathway Alteration Enrichments☆10Jan 21, 2019Updated 7 years ago
- python access to UCSC genomes database☆138Aug 27, 2020Updated 5 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆32Oct 9, 2017Updated 8 years ago