Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly
☆85Mar 22, 2026Updated 4 months ago
Alternatives and similar repositories for guacamole
Users that are interested in guacamole are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Variant Caller, Distributed. Apache 2 licensed.☆72Mar 11, 2019Updated 7 years ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- Personalized cancer epitope discovery and peptide vaccine prediction pipeline☆30Nov 14, 2017Updated 8 years ago
- ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 li…☆1,056Mar 17, 2026Updated 4 months ago
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Bioinformatics Ketrew Pipelines☆27Nov 14, 2021Updated 4 years ago
- Interactive in-browser track viewer☆281Oct 26, 2021Updated 4 years ago
- SparkBWA is a new tool that exploits the capabilities of a Big Data technology as Apache Spark to boost the performance of one of the mos…☆70Sep 5, 2019Updated 6 years ago
- Collection of scripts for working with Wiggle files and analyzing sequencing data