googlegenomics / datalab-examplesLinks
Example Cloud Datalab iPython Notebooks for genomics use cases.
☆25Updated 8 years ago
Alternatives and similar repositories for datalab-examples
Users that are interested in datalab-examples are comparing it to the libraries listed below
Sorting:
- Quality control methods for human genomic variants.☆62Updated 3 years ago
- Advanced BigQuery examples on genomic data.☆88Updated 8 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.☆54Updated 6 years ago
- Examples of using CloudML with genomic data.☆18Updated 6 years ago
- Machine-curated database of genetic disease and genome-wide association studies☆57Updated 6 years ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆125Updated 2 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- Recipes for bioinformatics analyses with scikit-bio☆42Updated last month
- A scalable genome browser. Apache 2 licensed.☆126Updated 2 years ago
- High throughput, pain-free big data pipelines.☆30Updated 8 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 7 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆25Updated 9 years ago
- Ready-to-go Parquet-formatted public 'omics datasets☆30Updated 9 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆27Updated 6 years ago
- Python graph database framework for bioinformatics☆94Updated 3 years ago
- A wrapper-library for reading openSNP data☆49Updated 7 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. …☆105Updated 2 years ago
- VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information☆33Updated 8 years ago
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- Vector space representation of genetic data☆36Updated 8 years ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 3 months ago
- Official repository for GDC User Guides in Markdown format☆68Updated last year
- GCP Variant Transforms☆141Updated 4 months ago
- Bio4j abstract model and general entry point to the project☆120Updated 8 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆238Updated 5 years ago
- Deprecated☆100Updated 6 years ago
- CS273B Deep Learning for Genomics Course Materials☆34Updated 5 years ago
- Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly☆85Updated 7 years ago