Example Cloud Datalab iPython Notebooks for genomics use cases.
☆25Sep 5, 2017Updated 8 years ago
Alternatives and similar repositories for datalab-examples
Users that are interested in datalab-examples are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workflows I find helpful for fungal genome annotation☆21Jun 30, 2023Updated 2 years ago
- Ebola virus surveillance☆15Aug 28, 2016Updated 9 years ago
- Lectures on Genome Wide Association Studies (GWAS) using Python, Limix and Jupyter Noteboos☆32Nov 20, 2020Updated 5 years ago
- Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction☆26Aug 3, 2017Updated 8 years ago
- Searchable archive of Tracking Jupyter newsletters☆15Jun 26, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- Transactions, Keys, and Values☆22Nov 3, 2017Updated 8 years ago
- Collection of fig-files to spin up stuff☆13Jul 27, 2017Updated 8 years ago
- Inline matplotlibrcs for integration with base16 ipython notebook themes☆26Apr 30, 2014Updated 12 years ago
- Fit phenomenological sigmoid and impulse curves with priors to improve interpretability☆10May 29, 2024Updated last year
- Software for detecting transposable element insertions from next-generation sequencing data☆14Mar 12, 2021Updated 5 years ago
- Import script needed to build FluPRINT database from source☆11May 23, 2019Updated 7 years ago
- ☆12May 16, 2023Updated 3 years ago
- Hands-free on-device voice loop for macOS: Apple SFSpeechRecognizer + cloned-voice TTS, continuous listening, zero cloud. Originally buil…☆42Apr 30, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Jun 11, 2017Updated 8 years ago
- Single Cell Segmentation☆15May 15, 2020Updated 6 years ago
- Ontology for Immune Epitopes☆13Updated this week
- Immunogenetic Data Tools related to HLA, GLStrings, Linkage Disequilibrium☆11Jun 14, 2023Updated 2 years ago
- command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig☆17May 2, 2020Updated 6 years ago
- ☆10Oct 6, 2020Updated 5 years ago
- This repository contains some simple and useful scripts that can be helpful for handling data☆11May 8, 2023Updated 3 years ago
- Transforming SemRep Predications into an Open Biomedical Linked Data Resource☆11Jan 26, 2018Updated 8 years ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Feb 27, 2019Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Initial steps toward reproducible research (a minimal tutorial)☆38Apr 17, 2026Updated last month
- ☆14Jun 5, 2024Updated last year
- ☆14Jan 8, 2016Updated 10 years ago
- A transposition caller.☆12Oct 5, 2023Updated 2 years ago
- Strongly typed file path and file system operations.☆26Jun 24, 2025Updated 11 months ago
- Vote ALlocating Immune System, an immune-inspired classification algorithm☆24Dec 14, 2018Updated 7 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆12Oct 23, 2024Updated last year
- GeneNetwork (2nd generation)☆39Updated this week
- ☆12May 14, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Oct 22, 2018Updated 7 years ago
- The code was developed for training diverse ML and DL models to predict PROTACs degradation. Data cleaning for two public datasets, PROTA…☆16Oct 31, 2023Updated 2 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago
- R package with tools to manipulate survey data (typically originating from SPSS export)☆23Jan 17, 2026Updated 4 months ago
- Nextflow Workshop at Rocky Mountain Genomics HackCon 2018☆10Jun 19, 2018Updated 7 years ago
- 2D space game based on The Three-Body Problem, which is the famous sci-fi novel wrote by CiXinLiu.☆13Jan 13, 2019Updated 7 years ago
- ☆11Jan 20, 2020Updated 6 years ago