google-research / connectomicsLinks
☆47Updated 2 weeks ago
Alternatives and similar repositories for connectomics
Users that are interested in connectomics are comparing it to the libraries listed below
Sorting:
- 🌈☆66Updated 2 months ago
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- Read and write Neuroglancer datasets programmatically.☆168Updated this week
- A library to facilitate machine learning on multi-dimensional images.☆87Updated this week
- ☆29Updated 3 weeks ago
- Scalable Optical Flow-based Image Montaging and Alignment☆83Updated 2 weeks ago
- ☆32Updated 4 months ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆38Updated last year
- MorphoFeatures code and data☆22Updated 2 years ago
- Python package for deep learning based image to image transformation☆53Updated last month
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆62Updated 2 weeks ago
- End-to-end light-sheet image analysis for mouse brains, with DL training data generated in VR☆34Updated last month
- PyTorch Connectomics: segmentation toolbox for EM connectomics☆186Updated this week
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated last year
- Simple watershed and agglomeration library for affinity graphs.☆26Updated 3 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated this week
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Updated 6 months ago
- Code to the paper "Self-Supervised Graph Representation Learning for Neuronal Morphologies"☆16Updated last year
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated last week
- Cloud-based data annotation tools for biological images☆82Updated last year
- A Python package for feature extraction of neural morphologies☆45Updated 2 months ago
- Tools for distributed alignment of massive images☆89Updated this week
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆60Updated 3 months ago
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆21Updated 7 months ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆35Updated 2 weeks ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆12Updated 4 months ago
- Software package for neuron reconstruction and visualization☆40Updated 6 months ago
- Block-wise operations for large nD volumes☆43Updated 3 weeks ago
- 3D shape analysis using deep learning☆28Updated 2 months ago
- simple package for augmentation of n-dimensional arrays☆34Updated 2 years ago