berenslab / MorphoPyLinks
☆42Updated this week
Alternatives and similar repositories for MorphoPy
Users that are interested in MorphoPy are comparing it to the libraries listed below
Sorting:
- Deconvolution of calcium imaging data☆98Updated 7 months ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆14Updated this week
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Repository for collecting materials from nwb hackathons☆24Updated 4 months ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated 2 weeks ago
- ☆12Updated 3 weeks ago
- motion correction☆17Updated 2 years ago
- Shareable, interactive scientific figures in the cloud☆36Updated 2 weeks ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆37Updated last year
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆32Updated last month
- Adaptive Platform for Neuroscience Experiments☆40Updated last week
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- 3-D imaging visualisation through slicing☆30Updated 8 months ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Updated 4 years ago
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆53Updated this week
- ☆22Updated 10 months ago
- IBL core shared libraries☆63Updated this week
- Python package providing mesoscale connectivity models for mouse.☆39Updated last year
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Utilities for formatting matplotlib figures☆31Updated 6 months ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated 5 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 2 weeks ago
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆50Updated last month
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated last month