berenslab / MorphoPyLinks
A Python package for feature extraction of neural morphologies
☆46Updated 3 months ago
Alternatives and similar repositories for MorphoPy
Users that are interested in MorphoPy are comparing it to the libraries listed below
Sorting:
- Deconvolution of calcium imaging data☆104Updated 11 months ago
- IaC codebase for the NeuroCAAS Platform☆39Updated 2 years ago
- ☆13Updated 2 months ago
- Shareable, interactive scientific figures in the cloud☆37Updated 4 months ago
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆27Updated 4 months ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Live Mouse Tracker analysis☆34Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Adaptive Platform for Neuroscience Experiments☆42Updated 2 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 2 months ago
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆51Updated last month
- IBL core shared libraries☆66Updated last week
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆15Updated last week
- Segmentation of anatomical structures in a common coordinate space☆35Updated 2 weeks ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- 3-D imaging visualisation through slicing☆31Updated last year
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- motion correction☆17Updated 2 years ago
- Browser-based NWB visualization and DANDI exploration☆62Updated last month
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Utilities for formatting matplotlib figures☆31Updated 10 months ago
- ☆23Updated last year
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- ☆34Updated 8 months ago
- A collection of notebooks to provide examples of using Microns-explorer.org datasets☆38Updated last year
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last month
- Region Of Interest Classification and Tracking☆27Updated last week
- a Python machine learning library for neurophysiology data☆36Updated 7 years ago
- GPU-based 3D non-rigid volumetric registration☆41Updated 4 months ago