janelia-flyem / NeuTu
Software package for neuron reconstruction and visualization
☆38Updated last year
Alternatives and similar repositories for NeuTu
Users that are interested in NeuTu are comparing it to the libraries listed below
Sorting:
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 4 years ago
- Tools for distributed alignment of massive images☆81Updated 3 weeks ago
- Block-wise task scheduling for large nD volumes.☆30Updated last month
- ☆45Updated 4 years ago
- ☆12Updated 3 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆48Updated 2 weeks ago
- The ImageJ framework for quantification of neuronal anatomy☆48Updated this week
- Binary releases of Vaa3D and related software components☆44Updated last year
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated 10 months ago
- ☆12Updated last month
- www.vaa3d.org☆78Updated 7 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 2 months ago
- A system for building mouse brain atlas from histology series☆11Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆82Updated last week
- Automated 3D brain registration with support for multiple species and atlases.☆134Updated last week
- NEURD: A mesh decomposition framework for automated proofreading and morphological analysis of neuronal EM reconstructions☆15Updated this week
- TREES toolbox☆28Updated 3 weeks ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆73Updated 2 weeks ago
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18Updated 4 years ago
- Documentations of BigNeuron Project progress☆24Updated 9 years ago
- QC and cell type assignment for patch-seq transcriptomics data☆19Updated last year
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated last month
- WebGL-based viewer for volumetric data☆23Updated this week
- Umbrella package to help install/load nat packages☆11Updated 3 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated last year
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆120Updated this week
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆89Updated 3 years ago