janelia-flyem / NeuTuLinks
Software package for neuron reconstruction and visualization
☆39Updated 4 months ago
Alternatives and similar repositories for NeuTu
Users that are interested in NeuTu are comparing it to the libraries listed below
Sorting:
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆42Updated 2 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Tools for distributed alignment of massive images☆86Updated last month
- www.vaa3d.org☆80Updated 7 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆55Updated last week
- ☆45Updated 5 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆22Updated 6 months ago
- Block-wise task scheduling for large nD volumes.☆32Updated 6 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- Developing a Brain Atlas through Deep Learning☆53Updated 2 months ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated 2 weeks ago
- Automated 3D brain registration with support for multiple species and atlases.☆137Updated last week
- WebGL-based viewer for volumetric data☆24Updated this week
- A system for building mouse brain atlas from histology series☆11Updated 5 years ago
- Binary releases of Vaa3D and related software components☆46Updated last year
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆128Updated 2 weeks ago
- Read and write Neuroglancer datasets programmatically.☆159Updated last week
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆88Updated 4 years ago
- www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200☆43Updated 3 weeks ago
- www.vaa3d.org☆113Updated last year
- Segmentation of anatomical structures in a common coordinate space☆33Updated last week
- ☆12Updated 3 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆89Updated last year
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆76Updated 3 weeks ago
- The ImageJ framework for quantification of neuronal anatomy☆52Updated this week
- Documentations of BigNeuron Project progress☆24Updated 9 years ago
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Updated 6 years ago
- Neuronal Morphology Analysis Tool☆108Updated 7 months ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago