Software package for neuron reconstruction and visualization
☆40May 27, 2025Updated last year
Alternatives and similar repositories for NeuTu
Users that are interested in NeuTu are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated last week
- A library to facilitate machine learning on multi-dimensional images.☆91Jun 1, 2026Updated last month
- tools for importing connectome data into neo4j☆40Feb 24, 2023Updated 3 years ago
- NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neuron…☆77Jun 12, 2026Updated 3 weeks ago
- Packages for the Unity game engine, emphasizing animal studies in VR.☆19Jun 11, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 2 months ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated last year
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Jun 11, 2026Updated 3 weeks ago
- A unified framework for skeletonization, morphological analysis, and connectivity analysis.☆43Aug 23, 2024Updated last year
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆45Jul 28, 2025Updated 11 months ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 5 months ago
- Simple watershed and agglomeration library for affinity graphs.☆30Sep 18, 2025Updated 9 months ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Jun 25, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Binary releases of Vaa3D and related software components☆45Nov 11, 2023Updated 2 years ago
- ☆12Mar 25, 2022Updated 4 years ago
- Python client utilties for interacting with the neuPrint connectome analysis service☆38May 23, 2026Updated last month
- Flood-Filling Networks for instance segmentation in 3d volumes.☆349Updated this week
- Flood filling networks for segmenting electron microscopy of neural tissue☆26Dec 26, 2022Updated 3 years ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆73May 18, 2026Updated last month
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆45Aug 12, 2024Updated last year
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- PyKNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for high-throughput image annotation…☆18May 18, 2020Updated 6 years ago
- Public code for Zheng, Lauritzen et al. (2018)☆15Mar 22, 2019Updated 7 years ago
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 4 years ago
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Nov 28, 2016Updated 9 years ago
- Read and write Neuroglancer datasets programmatically.☆174Jun 4, 2026Updated last month
- ☆17Feb 3, 2018Updated 8 years ago
- WebGL-based viewer for volumetric data☆1,336Jun 27, 2026Updated last week
- PyNeval, a toolbox for quantative analysis on neuron reconstruction result.☆17Nov 18, 2021Updated 4 years ago
- ☆16Nov 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Neuronal Morphology Analysis Tool☆109Feb 26, 2025Updated last year
- Commands and Classes for interfacing between Imaris and Fiji☆13Apr 20, 2026Updated 2 months ago
- The framework for quantification of neuronal anatomy☆60Jun 26, 2026Updated last week
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Apr 18, 2026Updated 2 months ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated 2 years ago
- ☆15Feb 5, 2025Updated last year
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…