A suite of regression-based tools for ribosome profiling data analysis
☆10Oct 3, 2022Updated 3 years ago
Alternatives and similar repositories for Ribolog
Users that are interested in Ribolog are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python implementation of TEISER also capable of using SHAPE structural probing data☆12Jan 7, 2025Updated last year
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago
- Peak calling for 4C data☆13May 4, 2018Updated 8 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16May 17, 2022Updated 4 years ago
- ☆16Jun 3, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆20Jun 8, 2023Updated 3 years ago
- Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing☆18Jun 6, 2024Updated 2 years ago
- Flexible analysis of high-content CRISPR screening☆33Mar 6, 2026Updated 4 months ago
- A legacy repository. Was replaced by distiller, cooler, and cooltools.☆21Mar 4, 2020Updated 6 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- The Single-Cell Pathology Landscape of Breast Cancer☆28Jan 14, 2020Updated 6 years ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Aug 4, 2020Updated 5 years ago
- A versatile method for systematic identification of differential RNA splicing across platforms☆16Jun 22, 2026Updated 2 weeks ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Jun 10, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A modular, containerized pipeline for PRO-seq data processing☆11Mar 6, 2026Updated 4 months ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆28Feb 4, 2023Updated 3 years ago
- Makes distinct TSS of each gene from a Gencode annotation☆10Oct 19, 2016Updated 9 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated last year
- ☆10Oct 24, 2024Updated last year
- Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.☆27Apr 13, 2025Updated last year
- LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model☆14Jun 18, 2021Updated 5 years ago
- A python port of the Single Molecule Tools software by Adam Wollman, aka. ADEMSCode.☆12Updated this week
- Step by step tutorial for CAGE analysis☆10Sep 18, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆103May 27, 2026Updated last month
- Localization of transcribed enhancers and quntification of their usage from the initiation sites of bidirectionally transcribed loci☆14Dec 19, 2024Updated last year
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Jul 29, 2020Updated 5 years ago
- Spatial RNA velocity☆10Oct 3, 2024Updated last year
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆62May 17, 2026Updated last month
- Obsidian plugin that enhances the Excluded files setting bringing gitignore syntax.☆60Jul 2, 2026Updated last week
- LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution an…☆15Apr 7, 2026Updated 3 months ago
- Statistical analysis for spatial omics data☆11Jul 30, 2022Updated 3 years ago
- ☆12Sep 4, 2019Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆12Oct 23, 2023Updated 2 years ago
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- A repository for my work on rCRUX☆14Jun 21, 2024Updated 2 years ago
- Detecting Regulatory Elements using GRO-seq and PRO-seq☆41Apr 30, 2025Updated last year
- Position-wise analysis of sequencing and genomics data☆41Jul 6, 2023Updated 3 years ago
- polyApipe☆22Feb 10, 2025Updated last year
- ☆14Dec 16, 2022Updated 3 years ago