☆10May 15, 2025Updated last year
Alternatives and similar repositories for longcallR-nf
Users that are interested in longcallR-nf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- longcallR is a tool for SNP calling, haplotype phasing, and allele-specific analysis with long-read RNA-seq data.☆97Aug 2, 2026Updated 2 months ago
- VCF compression tool☆10Jun 24, 2024Updated 2 years ago
- ☆31Nov 28, 2024Updated last year
- Nanopore direct RNA basecaller☆11Oct 27, 2022Updated 3 years ago
- ☆12Aug 17, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- fork of dorado that supports S/BLOW5☆13Oct 14, 2026Updated last week
- ☆27Nov 14, 2025Updated 11 months ago
- Repository for RecallME-v.0.1 a variant calling pipelines benchmarker and optimizer☆13Dec 18, 2023Updated 2 years ago
- ☆27May 8, 2022Updated 4 years ago
- This is the software for FAst Marginal Epistasis test (FAME)☆14Jul 21, 2026Updated 3 months ago
- ☆17Jan 13, 2025Updated last year
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆14Sep 22, 2026Updated last month
- ☆14Oct 17, 2024Updated 2 years ago
- ☆17Oct 12, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data☆15May 17, 2025Updated last year
- Regenotyping structural variants through an accurate and efficient force-calling method☆26Apr 17, 2026Updated 6 months ago
- Single cell isoform heterogeneity and differential alternative splicing analysis☆14Sep 14, 2025Updated last year
- ☆20Nov 17, 2025Updated 11 months ago
- HitSV: Maximizing discovery of structural variants across sequencing technologies☆46Aug 12, 2026Updated 2 months ago
- WDL pipelines for running regenie☆12Oct 9, 2026Updated 2 weeks ago
- GWAS and rare variants tests at high speed using regenie☆16Oct 14, 2026Updated last week
- Automatised pipeline of ConsensuSV workflow.☆24Aug 23, 2023Updated 3 years ago
- 💥 k-mer based variant calling and genotyping — sensitive, fast, and easy to use☆21Oct 12, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- RNA modification detection using Nanopore raw reads with Deep One Class classification☆20May 14, 2021Updated 5 years ago
- Tool for drawing gene structures from genome annotation files.☆22Jun 20, 2026Updated 4 months ago
- Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu☆26Oct 12, 2026Updated last week
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition☆23Sep 12, 2023Updated 3 years ago
- Variant catalogue pipeline☆26Jan 30, 2026Updated 8 months ago
- RNAseq pipeline for alternative splicing junctions☆15Mar 26, 2026Updated 6 months ago
- Improving gene isoform quantification with miniQuant☆44Sep 30, 2026Updated 3 weeks ago
- ☆39Apr 25, 2023Updated 3 years ago
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆18Sep 6, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- somatic SV calling on matched tumor-normal co-assembly graphs☆23Aug 1, 2024Updated 2 years ago
- University of Sydney colour palettes for ggplot2☆16Oct 6, 2026Updated 2 weeks ago
- Secure and federated genome-wide association studies☆19Mar 19, 2025Updated last year
- Xron - an omni basecaller for ONT reads.☆24Nov 27, 2024Updated last year
- This is the BWA workflow used in the PanCancer project used to allign all the BAM files.☆11Dec 27, 2022Updated 3 years ago
- Continuous Wavelet Dynamic Time Warping for unbalanced global mapping of two signals☆20Jan 14, 2019Updated 7 years ago
- Splitting of sequence reads by internal adapter sequence search☆50May 30, 2023Updated 3 years ago