Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
☆173Mar 24, 2026Updated 7 months ago
Alternatives and similar repositories for drop
Users that are interested in drop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆58Feb 11, 2026Updated 8 months ago
- FRASER - Find RAre Splicing Events in RNA-seq☆59Oct 27, 2026Updated last week
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆20Oct 15, 2026Updated 3 weeks ago
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 4 years ago
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆75Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Jasmine: SV Merging Across Samples☆266Dec 20, 2024Updated last year
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆73Sep 4, 2024Updated 2 years ago
- (WIP) best-practices workflow for rare disease☆64Jul 1, 2024Updated 2 years ago
- fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"☆343Updated this week
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆42Oct 28, 2026Updated last week
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Mar 7, 2022Updated 4 years ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Mar 25, 2026Updated 7 months ago
- Structural variant (SV) analysis tools☆42Jul 1, 2024Updated 2 years ago
- Visualizing transcript structure and annotation using ggplot2☆171Aug 24, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Structural variant toolkit for VCFs☆428Oct 3, 2026Updated last month
- ☆47Jul 16, 2026Updated 3 months ago
- TIDDIT - structural variant calling☆80Jul 20, 2026Updated 3 months ago
- Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.☆437Sep 2, 2026Updated 2 months ago
- genetic variant expressions, annotation, and filtering for great good.☆274May 12, 2026Updated 5 months ago
- Plot structural variant signals from many BAMs and CRAMs☆574Jul 13, 2024Updated 2 years ago
- Rare Disease variant reanalysis tool☆89Updated this week
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆14Oct 26, 2026Updated last week
- Per-base per-nucleotide depth analysis☆153Oct 31, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- using all the bits for echt rapid variant annotation and filtering☆166Jul 22, 2026Updated 3 months ago
- Fast, efficient RNA-Seq metrics for quality control and process optimization☆182Nov 2, 2024Updated 2 years ago
- A comprehensive platform for population-scale genomic analyses☆10Apr 20, 2026Updated 6 months ago
- Annotation and Ranking of Structural Variation☆310Aug 11, 2026Updated 2 months ago
- Deep learning-based structural variant filtering method☆40Nov 19, 2023Updated 2 years ago
- ☆42Jul 3, 2025Updated last year
- Svirlpool: structural variant detection from long read sequencing by local assembly☆10Oct 11, 2026Updated 3 weeks ago
- A structural variation pipeline for short-read sequencing☆210Updated this week
- Pipeline for generating RNAseq-based cancer patient reports☆15Aug 24, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆21Jun 13, 2022Updated 4 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated last year
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 6 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆84Feb 14, 2025Updated last year
- A tool for somatic structural variant calling using long reads☆181Updated this week
- web-based analysis tool for rare disease genomics☆220Updated this week