Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
☆164Mar 24, 2026Updated this week
Alternatives and similar repositories for drop
Users that are interested in drop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆56Feb 11, 2026Updated last month
- FRASER - Find RAre Splicing Events in RNA-seq☆54Feb 11, 2026Updated last month
- (WIP) best-practices workflow for rare disease☆62Jul 1, 2024Updated last year
- Jasmine: SV Merging Across Samples☆244Dec 20, 2024Updated last year
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Structural variant (SV) analysis tools☆41Jul 1, 2024Updated last year
- fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"☆306Nov 14, 2025Updated 4 months ago
- Deep learning-based structural variant filtering method☆39Nov 19, 2023Updated 2 years ago
- TIDDIT - structural variant calling☆78Updated this week
- ☆45Sep 10, 2024Updated last year
- Plot structural variant signals from many BAMs and CRAMs☆562Jul 13, 2024Updated last year
- Visualizing transcript structure and annotation using ggplot2☆166Aug 24, 2024Updated last year
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Sep 4, 2024Updated last year
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Apr 28, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Structural variant toolkit for VCFs☆401Updated this week
- Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.☆404Feb 3, 2026Updated last month
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- A comprehensive platform for population-scale genomic analyses☆10Jul 10, 2023Updated 2 years ago
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆141Feb 14, 2025Updated last year
- Per-base per-nucleotide depth analysis☆149Mar 16, 2026Updated last week
- using all the bits for echt rapid variant annotation and filtering☆154Feb 18, 2026Updated last month
- A new tool to infer sex from massively parallel sequencing data.☆17May 16, 2025Updated 10 months ago
- vembrane filters VCF records using python expressions☆69Mar 17, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆36Sep 13, 2023Updated 2 years ago
- Annotation and Ranking of Structural Variation☆290Mar 17, 2026Updated last week
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 2 years ago
- Nanopore demultiplexing, QC and alignment pipeline☆221Nov 20, 2025Updated 4 months ago
- Genome browser and variant annotation☆392Oct 30, 2025Updated 4 months ago
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 5 years ago
- genetic variant expressions, annotation, and filtering for great good.☆274Dec 15, 2025Updated 3 months ago
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- A structural variation pipeline for short-read sequencing☆201Mar 20, 2026Updated last week
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Search for activating regulatory variants in the tumor genome☆14Apr 11, 2025Updated 11 months ago
- expressions on VCFs☆91Mar 17, 2026Updated last week
- Toolset for SV simulation, comparison and filtering☆414Dec 1, 2023Updated 2 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆82Feb 14, 2025Updated last year
- ☆39Jul 3, 2025Updated 8 months ago
- A modular annotation tool for genomic variants☆147Mar 18, 2026Updated last week
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 5 years ago