bli25 / RSEM_tutorialLinks
A short tutorial on how to use RSEM
☆137Updated 5 years ago
Alternatives and similar repositories for RSEM_tutorial
Users that are interested in RSEM_tutorial are comparing it to the libraries listed below
Sorting:
- ENCODE Uniform processing pipeline for ChIP-seq☆123Updated 5 years ago
- Detecting sites of genomic enrichment☆192Updated 2 years ago
- ☆153Updated 2 years ago
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆164Updated 2 months ago
- ☆148Updated 2 months ago
- Discovering known and novel miRNAs from small RNA sequencing data☆152Updated 11 months ago
- Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …☆222Updated last year
- ATAC-seq peak-calling and QC analysis pipeline☆207Updated 3 weeks ago
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆144Updated 2 years ago
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆255Updated 6 months ago
- Check strandedness of RNA-Seq fastq files☆125Updated 2 years ago
- AQUAS TF and histone ChIP-seq pipeline☆109Updated 3 years ago
- ASCAT R package☆186Updated 4 months ago
- Generate IGV style locus tracks from bigWig files in R☆167Updated 9 months ago
- ☆137Updated 6 years ago
- ☆268Updated 8 months ago
- SEACR: Sparse Enrichment Analysis for CUT&RUN☆110Updated 2 years ago
- ATAC-seq and DNase-seq processing pipeline☆166Updated 3 years ago
- A collection of scripts and notes related to genomics and bioinformatics☆214Updated 2 weeks ago
- dN/dS methods to quantify selection in cancer and somatic evolution☆223Updated 2 months ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- Application for making ENCODE Blacklists☆313Updated 4 years ago
- AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …☆149Updated last year
- STAR based ENCODE Long RNA-Seq processing pipeline☆95Updated 4 years ago
- SUPPA: Fast quantification of splicing and differential splicing☆278Updated last year
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆109Updated 5 years ago
- Quick mining and visualization of NGS data by integrating genomic databases☆267Updated 2 years ago
- IDR☆172Updated 6 years ago
- Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.☆202Updated 7 years ago
- Finder of Somatic Fusion Genes in RNA-seq data☆146Updated 2 years ago