bli25 / RSEM_tutorialLinks
A short tutorial on how to use RSEM
☆137Updated 5 years ago
Alternatives and similar repositories for RSEM_tutorial
Users that are interested in RSEM_tutorial are comparing it to the libraries listed below
Sorting:
- ENCODE Uniform processing pipeline for ChIP-seq☆123Updated 5 years ago
- Detecting sites of genomic enrichment☆192Updated 2 years ago
- Discovering known and novel miRNAs from small RNA sequencing data☆151Updated 10 months ago
- Check strandedness of RNA-Seq fastq files☆124Updated 2 years ago
- ☆147Updated last month
- ☆138Updated 6 years ago
- STAR based ENCODE Long RNA-Seq processing pipeline☆95Updated 4 years ago
- AQUAS TF and histone ChIP-seq pipeline☆109Updated 3 years ago
- Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …☆221Updated last year
- ATAC-seq peak-calling and QC analysis pipeline☆206Updated this week
- IDR☆172Updated 6 years ago
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆163Updated last month
- ☆152Updated 2 years ago
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆143Updated 2 years ago
- Generate IGV style locus tracks from bigWig files in R☆164Updated 8 months ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- ASCAT R package☆183Updated 3 months ago
- SEACR: Sparse Enrichment Analysis for CUT&RUN☆109Updated 2 years ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆216Updated 2 weeks ago
- Quick mining and visualization of NGS data by integrating genomic databases☆266Updated 2 years ago
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆108Updated 5 years ago
- Application for making ENCODE Blacklists☆313Updated 4 years ago
- SUPPA: Fast quantification of splicing and differential splicing☆276Updated last year
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆160Updated 2 years ago
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆138Updated 10 months ago
- deconstructSigs☆142Updated 2 years ago
- AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …☆147Updated last year
- Script to automatically create and run IGV snapshot batchscripts☆141Updated 2 years ago
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆254Updated 5 months ago
- dN/dS methods to quantify selection in cancer and somatic evolution☆222Updated last month