ga4gh / vrs-pythonLinks
GA4GH Variation Representation Python Implementation
☆61Updated last week
Alternatives and similar repositories for vrs-python
Users that are interested in vrs-python are comparing it to the libraries listed below
Sorting:
- Extensible specification for representing and uniquely identifying biological sequence variation☆94Updated this week
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated 2 months ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆84Updated 2 weeks ago
- A modular annotation tool for genomic variants☆139Updated last week
- An information model for representing variant annotations.☆25Updated 2 weeks ago
- A repository for the schemas used for the Data Repository Service.☆63Updated last week
- A collection of reusable WDL tasks. Category:Other☆88Updated 2 weeks ago
- Collect of SO Ontologies☆103Updated 3 months ago
- C++ Library to parse Illumina InterOp files☆80Updated 2 weeks ago
- VCF visualization interface☆175Updated last week
- A Python package for pharmacogenomics (PGx) research☆81Updated last month
- Transcript versions for HGVS libraries☆33Updated 2 months ago
- This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…☆128Updated 5 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆63Updated last week
- non-redundant, compressed, journalled, file-based storage for biological sequences☆47Updated last month
- The nimble & robust variant annotator☆188Updated last year
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes☆66Updated 2 months ago
- Public repository for VariantValidator project☆79Updated last week
- Nextflow Tower system☆151Updated 10 months ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆174Updated last year
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Updated 7 years ago
- ☆186Updated 2 years ago
- TransVar - multiway annotator for precision medicine☆126Updated 2 years ago
- Calling star alleles in highly polymorphic pharmacogenes (e.g. CYP450 genes) by leveraging genome graph-based variant detection.☆34Updated 2 months ago
- MyVariant.info: A BioThings API for human variant annotations☆96Updated 3 months ago
- ☆82Updated 7 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆94Updated 6 years ago
- genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF☆144Updated 5 months ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls☆208Updated 4 years ago