ga4gh / vrs-pythonLinks
GA4GH Variation Representation Python Implementation
☆59Updated 3 weeks ago
Alternatives and similar repositories for vrs-python
Users that are interested in vrs-python are comparing it to the libraries listed below
Sorting:
- Extensible specification for representing and uniquely identifying biological sequence variation☆93Updated last month
- A modular annotation tool for genomic variants☆127Updated 2 weeks ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆70Updated 2 weeks ago
- An information model for representing variant annotations.☆21Updated 2 weeks ago
- A collection of reusable WDL tasks. Category:Other☆88Updated last month
- Transcript versions for HGVS libraries☆33Updated last month
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆83Updated last month
- Annotation of VCF variants with functional impact and from databases (executable+library)☆62Updated last month
- MyVariant.info: A BioThings API for human variant annotations☆95Updated last week
- Public repository for VariantValidator project☆77Updated last week
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes☆64Updated last month
- Scalable gVCF merging and joint variant calling for population sequencing projects☆166Updated last year
- A Tool to Annotate and Prioritize Exome Variants☆226Updated 3 weeks ago
- Collect of SO Ontologies☆100Updated last week
- A repository for the schemas used for the Data Repository Service.☆63Updated last month
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆89Updated 11 months ago
- Nextflow Tower system☆151Updated 7 months ago
- ☆82Updated 6 years ago
- A Python package for pharmacogenomics (PGx) research☆76Updated 7 months ago
- Generic Interactive Variant Analysis browser☆29Updated 3 years ago
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆46Updated 3 weeks ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆79Updated 5 months ago
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Updated 5 years ago
- The nimble & robust variant annotator☆185Updated last year
- Calling star alleles in highly polymorphic pharmacogenes (e.g. CYP450 genes) by leveraging genome graph-based variant detection.☆34Updated 3 months ago
- C++ Library to parse Illumina InterOp files☆79Updated 3 months ago
- CLI for interacting with Cromwell servers☆55Updated last year
- Testing building mulled containers for multi-requirement tools.☆78Updated last week
- TransVar - multiway annotator for precision medicine☆126Updated 2 years ago