GA4GH Variation Representation Python Implementation
☆62Feb 24, 2026Updated 3 weeks ago
Alternatives and similar repositories for vrs-python
Users that are interested in vrs-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Extensible specification for representing and uniquely identifying biological sequence variation☆96Feb 25, 2026Updated 3 weeks ago
- An information model for representing variant annotations.☆27Mar 12, 2026Updated last week
- Lightweight, portable variation registration and retrieval☆16Mar 13, 2026Updated last week
- Models and APIs for Genomic data. RETIRED 2018-01-24☆220Oct 28, 2022Updated 3 years ago
- Repository for the GA4GH phenopacket schema☆97Jan 20, 2026Updated 2 months ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆25Jan 12, 2026Updated 2 months ago
- Associations of genomic features, drugs and diseases☆48Dec 8, 2022Updated 3 years ago
- GA4GH Refget specifications docs☆16Nov 12, 2025Updated 4 months ago
- A crate for working with genomics chain files.☆15Updated this week
- Genevieve genome report tool☆14Dec 8, 2022Updated 3 years ago
- Services and guidelines for normalizing variants☆15Mar 16, 2026Updated last week
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Mar 16, 2026Updated last week
- Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature…☆289Updated this week
- A Boolean Algebra for Genetic Variants☆12Updated this week
- Simple matching of HTS samples based on HLA typing☆14Jan 4, 2017Updated 9 years ago
- Client side iobio library for building and executing iobio commands☆10Dec 31, 2018Updated 7 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆49Nov 10, 2025Updated 4 months ago
- simplified searching, fetching, and parsing records from NCBI using their E-utilities interface☆63Feb 9, 2026Updated last month
- Schema for chemistry ontology classes☆21Updated this week
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Apr 8, 2016Updated 9 years ago
- Ontology Based Profile Matching☆17May 20, 2022Updated 3 years ago
- Thousand Variant Callers Project Repository☆73Oct 17, 2019Updated 6 years ago
- A library for Web Ontology Language in Python created using a bridge from horned-owl to python using PyO3.☆23Feb 11, 2026Updated last month
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- All of Us public data browser.☆14Mar 2, 2026Updated 3 weeks ago
- UltimaGenomics repository for workflows compatible with AWS HealthOmics☆28Updated this week
- Accumulating container resource usage with workflow metadata☆19Mar 17, 2021Updated 5 years ago
- A Python package for pharmacogenomics (PGx) research☆84Jan 4, 2026Updated 2 months ago
- ☆13Apr 2, 2025Updated 11 months ago
- Tumour-only somatic mutation calling using long reads☆28Oct 28, 2024Updated last year
- A repository for the schemas used for the Data Repository Service.☆63Mar 9, 2026Updated 2 weeks ago
- Central repository for the VICC metakb web application☆15Updated this week
- Browser for ExAC consortium data☆106Jan 21, 2022Updated 4 years ago
- paplot creates various dynamic and interactive reports for cancer genome analysis.☆26Feb 1, 2023Updated 3 years ago
- Visualization and charting JS library for streaming genomic data☆19Dec 4, 2024Updated last year
- BrowseVCF is a web-based application and workflow to quickly prioritise disease-causative variants in VCF files.☆47Jun 26, 2020Updated 5 years ago
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆59Oct 29, 2023Updated 2 years ago
- Faultless AST for Open Biomedical Ontologies.☆29Oct 25, 2025Updated 4 months ago
- Ontological Interpretations for Web Property Graphs☆35Mar 19, 2021Updated 5 years ago