Alternatives and similar repositories for wdl-cwl-translator

Users that are interested in wdl-cwl-translator are comparing it to the libraries listed below

• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆39Updated 2 months ago
• snakemake / snakeface
  The snakemake interface, currently works like a notebook (under development)
  ☆18Updated 3 years ago
• umccr / cwl-ica
  A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide
  ☆9Updated last month
• inab / WfExS-backend
  Workflow Execution Service Backend
  ☆18Updated last week
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆43Updated last year
• snakemake / snakedeploy
  deploy a snakemake pipeline directly from version control (under development)
  ☆24Updated 2 months ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• sbg / sevenbridges-cwl
  Seven Bridges Python library for programatic generation of CWL workflows.
  ☆20Updated 2 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 10 months ago
• conda-incubator / conda-env-builder
  Build and maintain multiple custom conda environments all in one place.
  ☆38Updated 5 months ago
• biowdl / wdl-aid
  Automatic Input Documentation for WDL workflows
  ☆12Updated 8 months ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 6 months ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• common-workflow-lab / ipython2cwl
  IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
  ☆15Updated 2 years ago
• SciDAS / nextflow-api
  ☆35Updated 2 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• sgkit-dev / vcztools
  Partial reimplementation of bcftools for VCF Zarr
  ☆13Updated this week
• HumanCellAtlas / table-testing
  requirements, examples, and tests for expression matrix file formats
  ☆22Updated 6 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 6 years ago
• epruesse / ymp
  Flexible omics pipeline
  ☆18Updated this week
• ncbi / JUDI
  This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many p…
  ☆34Updated 3 years ago
• ASaiM / framework
  Open-source opinionated Galaxy-based framework for microbiota analysis
  ☆14Updated 4 years ago
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• snakemake / snakemake-github-action
  A Github action for running a Snakemake workflow
  ☆58Updated last month
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 4 months ago
• GMOD / jbrowse-jupyter
  A python package for showing JBrowse views
  ☆25Updated last year
• bionitio-team / bionitio-python
  Demonstrating best practices for bioinformatics command line tools
  ☆26Updated 4 years ago