hexylena / argparse2toolLinks
transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
☆27Updated last year
Alternatives and similar repositories for argparse2tool
Users that are interested in argparse2tool are comparing it to the libraries listed below
Sorting:
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆30Updated 5 years ago
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆15Updated 4 years ago
- X things you should take into consideration if you code for big data analysis☆23Updated 7 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Updated 10 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- Handy command line utility for Galaxy administrators☆24Updated 4 months ago
- Accumulating container resource usage with workflow metadata☆19Updated 4 years ago
- A translator from WDL to CWL v1.2☆27Updated 2 weeks ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆37Updated 2 weeks ago
- List of tools included in https://usegalaxy.eu☆34Updated last week
- The WES API is a standard way to run and manage portable workflows.☆87Updated last month
- Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.☆12Updated 5 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- Galaxy Admin Training☆60Updated last month
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- Minimal setup required to run Galaxy under Kubernetes☆43Updated this week
- biotoolsSchema : Tool description data model for computational tools in life sciences☆39Updated last month
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆26Updated 4 years ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆95Updated this week
- Galaxy process management and system administration tools☆13Updated 2 months ago
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆44Updated this week
- Registration of Galaxy Tools in Elixir☆12Updated 7 years ago
- A fast tool to convert BioJS components into Galaxy visualization plugins.☆14Updated 5 years ago
- ☆10Updated 4 months ago
- WDL plugin for pytest☆49Updated 2 years ago
- ☆93Updated last month
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17Updated 2 months ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 4 years ago
- APIs for discovering genomics tools, their metadata and their containers☆33Updated 3 weeks ago
- ☆12Updated 3 years ago