furkanmtorun / gnomad_python_api
𧬠gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).
β19Updated 3 years ago
Alternatives and similar repositories for gnomad_python_api:
Users that are interested in gnomad_python_api are comparing it to the libraries listed below
- BEAVR: A Browser-based tool for the Exploration And Visualization of RNAseq dataβ25Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq dataβ42Updated 2 years ago
- Keep Me Around: Intron Retention Detectionβ29Updated 6 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data setsβ37Updated 4 years ago
- Filters for false-positive mutation calls in NGSβ30Updated 5 years ago
- Versatile FASTA/FASTQ demultiplexer.β33Updated 8 months ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patternsβ28Updated last year
- A webtool for the clinical interpretation of CNVs in rare disease patientsβ12Updated 2 years ago
- The Zavolab Automated RNA-seq Pipelineβ35Updated 2 months ago
- Ultra-fast 5' and 3' demultiplexerβ26Updated 9 months ago
- Snakemake pipeline for microexon discovery and quantificationβ20Updated last month
- nRex: Germline and somatic single-nucleotide, short indel and structural variant callingβ12Updated 2 weeks ago
- Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated fromβ¦β28Updated 3 weeks ago
- A set of tools to annotate VCF files with expression and readcount dataβ29Updated 5 months ago
- Explore the cancer relevance of your gene listβ49Updated 5 months ago
- β25Updated 10 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditionsβ39Updated 2 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seqβ22Updated last year
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.β38Updated last year
- A BioWDL pipeline for processing RNA-seq data, starting with FASTQ files to produce expression measures and VCFs. Category:Multi-Sampleβ31Updated last year
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.β34Updated 7 months ago
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needsβ30Updated last year
- β34Updated 5 months ago
- β33Updated last year
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.β28Updated 5 years ago
- Toolkit for benchmarking fusion transcript predictionsβ18Updated 6 months ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq dataβ26Updated last year
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequenceβ25Updated 4 months ago
- ChIP-seq DC and QC Pipelineβ34Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneitβ¦β37Updated 10 months ago