Alternatives and similar repositories for cellcanvas-prototype

Users that are interested in cellcanvas-prototype are comparing it to the libraries listed below

• cellcanvas / surforama
  a tool for using surfaces to explore volumetric data in napari
  ☆18Updated 2 months ago
• alisterburt / napari-mrcfile-reader
  Read MRC format image files into napari using the mrcfile package from CCP-EM
  ☆18Updated last year
• brisvag / napari-label-interpolator
  ☆12Updated last year
• GrotjahnLab / surface_morphometrics
  Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
  ☆25Updated 3 weeks ago
• DeMarcoLab / autolamella
  autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.
  ☆19Updated 3 weeks ago
• hanjinliu / cylindra
  Fourier analysis and subtomogram averaging of heterogenic cylindrical structures
  ☆13Updated this week
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated last week
• KosinskiLab / colabseg
  Jupyter-based tool for membrane segmentation manipulation
  ☆9Updated last week
• pydev-guide / pydev-guide.github.io
  Guide to python package development for scientists
  ☆19Updated last month
• volume-em / empanada-napari
  Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari
  ☆23Updated 2 months ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• bionanopatterning / pyGPUreg
  ☆23Updated 8 months ago
• rosalindfranklininstitute / RedLionfish
  ☆30Updated last year
• hanjinliu / napari-filaments
  A napari plugin for filament analysis
  ☆9Updated last year
• janelia-cellmap / fibsem-tools
  Tools for handling FIB-SEM data and annotations
  ☆22Updated 3 months ago
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆25Updated 4 months ago
• betaseg / cellsketch
  ☆10Updated last year
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆34Updated this week
• bionanopatterning / scNodes
  ☆14Updated 4 months ago
• matplotlib / napari-matplotlib
  Linking napari layers with Matplotlib plots
  ☆40Updated 2 months ago
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆33Updated 3 years ago
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆13Updated 2 weeks ago
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆18Updated last month
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated 3 months ago
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 10 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated last week
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated 2 weeks ago
• HenriquesLab / NanoPyx
  Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
  ☆80Updated last week
• napari / napari-animation
  A napari plugin for making animations
  ☆84Updated 10 months ago
• CellArchLab / MemBrain
  ☆32Updated 2 years ago