Course and exercises on deep learning for microscopy image analysis
☆24Jul 9, 2026Updated last month
Alternatives and similar repositories for dl-for-micro
Users that are interested in dl-for-micro are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- Affinity based segmentation algorithms and tools☆12May 12, 2025Updated last year
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆87Updated this week
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆100Mar 24, 2026Updated 5 months ago
- ☆11May 6, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Multi-Object Tracking with Integer Linear Equations☆40Jul 21, 2026Updated last month
- R scripts to generate publication summary figures☆24Jun 13, 2021Updated 5 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆127Aug 24, 2026Updated last week
- ☆43Jul 23, 2024Updated 2 years ago
- Segment Anything for Microscopy☆715Updated this week
- ☆52May 1, 2025Updated last year
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆29Nov 17, 2025Updated 9 months ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Aug 24, 2026Updated last week
- ☆21Aug 20, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Distributed segmentation for bio-image-analysis☆42Jun 5, 2026Updated 2 months ago
- Package to preprocess ontologies and train OntoVAE models.☆16Jan 7, 2025Updated last year
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 8 months ago
- Analysis of TrackMate XML outputs in R☆17Mar 7, 2026Updated 5 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Segment Anything for Medical Imaging☆32Jun 6, 2026Updated 2 months ago
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 2 years ago
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 3 years ago
- Aditive manufacturing framework☆12May 26, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Running compute-intense parts of BigStitcher distributed☆30Aug 11, 2026Updated 2 weeks ago
- Visual interpretability of image-based classification models by generative latent space disentanglement☆14Jun 16, 2025Updated last year
- Python implementation of Underdamped Langevin Inference, a method to infer the dynamical equation of underdamped stochastic systems from …☆17Jun 20, 2025Updated last year
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆102Feb 17, 2023Updated 3 years ago
- A nifty library for graph based image segmentation.☆48May 3, 2025Updated last year
- Evolve new colour palettes☆15Feb 21, 2021Updated 5 years ago
- The mutex watershed for image segmentation.☆68May 6, 2021Updated 5 years ago
- ☆15Aug 12, 2022Updated 4 years ago
- A platform for compiling, analyzing, and exploring tracking data☆50Feb 2, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Liquid handling robot for in situ serial multiplexing☆18Apr 7, 2017Updated 9 years ago
- Compendium of tools for the Imaging Platform☆16Aug 20, 2026Updated last week
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- CSV exporter user script for icscards.nl☆15Jan 14, 2026Updated 7 months ago
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆41Updated this week
- easyROC: an interactive web-tool for ROC analysis☆17Apr 18, 2026Updated 4 months ago