Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.
☆22Mar 2, 2026Updated this week
Alternatives and similar repositories for SyMBac
Users that are interested in SyMBac are comparing it to the libraries listed below
Sorting:
- Image registration (alignment) software for large microscopy images☆27Oct 15, 2023Updated 2 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- Multi-Object Tracker using Integer Linear Equations☆38Dec 18, 2025Updated 2 months ago
- Image registration with the QuadDIRECT optimization algorithm☆17Mar 3, 2025Updated last year
- ☆20May 31, 2024Updated last year
- StarDist plugin for napari☆38Aug 24, 2024Updated last year
- ☆29Oct 22, 2025Updated 4 months ago
- I/O operations for OME-TIFF files in Julia☆25Nov 1, 2024Updated last year
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆66May 12, 2025Updated 9 months ago
- Threshold independent detection and localization of diffraction-limited spots.☆38Nov 1, 2022Updated 3 years ago
- ☆33May 2, 2025Updated 10 months ago
- Cookiecutter for napari plugins☆71Nov 6, 2024Updated last year
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Apr 9, 2025Updated 10 months ago
- Nanopore Plasmid Sequencing☆34Oct 10, 2023Updated 2 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Tools for distributed alignment of massive images☆93Updated this week
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- simple package for augmentation of n-dimensional arrays☆34Aug 10, 2023Updated 2 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- Run TFLITE models on the web☆12Jan 2, 2022Updated 4 years ago
- This is the repository for the 2021 uq-bio Summer School☆12May 9, 2022Updated 3 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Updated this week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated last month
- Read Carl Zeiss image files (CZI).☆34Feb 19, 2025Updated last year
- A route planner for DNA assembly☆36May 12, 2025Updated 9 months ago
- Image Annotator Web-app using Plotly-Dash, MongoDB, and MLflow☆14Nov 22, 2022Updated 3 years ago
- Results of the experiments performed for the paper "Open-Set Support Vector Machines".☆11Jul 6, 2023Updated 2 years ago
- ☆10Mar 8, 2023Updated 2 years ago
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆13Updated this week
- This repository implements the Fast Iterative Method (FIM) for use in python☆12Apr 15, 2024Updated last year
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, a…☆10Nov 28, 2023Updated 2 years ago
- Light microscopy simulation in python.☆43Feb 2, 2026Updated last month
- InVivoTools a set of neurophysiology tools, forked from VanHooserTools, containing tools for visual stimulation and analysis of calcium i…☆14Oct 12, 2025Updated 4 months ago
- Pure Python library for reading NIS Elements ND2 images and metadata☆49Jan 15, 2025Updated last year
- A Probably Private mini-course introducing AI/ML security via interactive videos and hands-on examples.☆25Dec 3, 2025Updated 3 months ago
- Reading whitespace-separated values in Rust☆11Nov 29, 2019Updated 6 years ago
- ☆10Apr 24, 2024Updated last year
- Scripts for building, training and validating CNNs for Connectomics☆13Mar 24, 2023Updated 2 years ago
- React-based web application for sepsis detection☆11Mar 10, 2019Updated 6 years ago