fukunagatsu / RIblastLinks
RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome analysis
☆17Updated 2 years ago
Alternatives and similar repositories for RIblast
Users that are interested in RIblast are comparing it to the libraries listed below
Sorting:
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- off-targeting assessment of Cas9 gRNAs☆15Updated 4 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated this week
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 11 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Updated 7 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆59Updated 10 months ago
- A pipeline for structural clustering of RNA secondary structures☆15Updated 4 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 9 months ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated 4 months ago
- ☆40Updated 6 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- The tRNA adaptation index☆19Updated 8 months ago
- Species-aware DNA language models capture regulatory elements and their evolution☆27Updated 2 years ago
- HTS-compatible wrapper for IgBlast V-(D)-J mapping tool☆53Updated last year
- This repository contains Docker files for the images maintained by the Phenotypic Evolution Group at the Institute for Molecular and Cell…☆54Updated last week
- Multi-Omics Peptide Generator☆30Updated 2 months ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- gatk4 RNA variant calling pipeline☆58Updated this week
- ☆72Updated 2 months ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- 3D hotspot mutation proximity analysis tool☆52Updated 2 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆28Updated last week
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 11 months ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆80Updated last month
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- Analysis of antibody NGS data☆13Updated 3 years ago
- Associated code for EvoWeaver publication☆16Updated 8 months ago