Alternatives and similar repositories for RIblast

Users that are interested in RIblast are comparing it to the libraries listed below

• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆27Updated last year
• BackofenLab / GraphClust-2
  A pipeline for structural clustering of RNA secondary structures
  ☆15Updated 4 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆27Updated 4 months ago
• AnimaTardeb / G4Hunter
  G4Hunter (2012_2015)- IECB - Bordeaux
  ☆13Updated 5 years ago
• rikenbit / ramdaq
  ☆13Updated 3 months ago
• mariodosreis / tai
  The tRNA adaptation index
  ☆18Updated last month
• RTH-tools / crisproff
  off-targeting assessment of Cas9 gRNAs
  ☆13Updated 4 years ago
• WrightLabScience / EvoWeaver-ExampleCode
  Associated code for EvoWeaver publication
  ☆14Updated 2 weeks ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆27Updated last year
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated last year
• labomics / MetaLogo
  MetaLogo: a heterogeneity-aware sequence logo generator and aligner
  ☆21Updated 2 years ago
• tsailabSJ / guideseq
  Analysis pipeline for the GUIDE-seq assay.
  ☆25Updated last month
• cyang235 / LncADeep
  LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning
  ☆27Updated 7 years ago
• bcgsc / ntEmbd
  Deep learning embedding for nucleotide sequences
  ☆18Updated 2 months ago
• CalabreseLab / seekr
  A library for counting small kmer frequencies in nucleotide sequences.
  ☆26Updated 7 months ago
• julianeweller / MinsePIE
  Modelling insertion efficiency for Prime Insertion Experiments
  ☆13Updated last year
• seqeralabs / nf-chai
  POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction
  ☆11Updated 4 months ago
• gagneurlab / absplice
  ☆39Updated 8 months ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆15Updated last year
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆38Updated this week
• Illumina / PromoterAI
  ☆43Updated last week
• kensung-lab / INSurVeyor
  An insertion caller for Illumina paired-end WGS data.
  ☆23Updated 10 months ago
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆27Updated last year
• HKU-BAL / Clair3-RNA
  Clair3-RNA - a long-read small variant caller for RNA sequencing data
  ☆23Updated 2 months ago
• comprna / CHEUI
  Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing
  ☆40Updated 10 months ago
• vicsanga / Postre
  POSTRE: Prediction Of STRuctural variant Effects
  ☆24Updated 3 months ago
• Weeks-UNC / shapemapper2
  Public repository for ShapeMapper 2 releases
  ☆35Updated 6 months ago
• CRISPRJWCHOI / CRISPR_toolkit
  CRISPR Indel, base edit analysis
  ☆10Updated 4 years ago
• FunctionLab / DeepArk
  Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning
  ☆17Updated 4 years ago
• Linlab-slu / TSSr
  ☆11Updated last month