off-targeting assessment of Cas9 gRNAs
☆15Apr 27, 2021Updated 4 years ago
Alternatives and similar repositories for crisproff
Users that are interested in crisproff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Core code for the DeepHF prediction tool☆40Jul 23, 2019Updated 6 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Package to Score Sequences using Rule Set 3☆15Nov 10, 2025Updated 5 months ago
- a guideRNA database generation tool☆18Mar 3, 2025Updated last year
- ☆14Jul 14, 2023Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆25Apr 2, 2026Updated last week
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆26Jul 28, 2022Updated 3 years ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆27Mar 6, 2026Updated last month
- Uses cDBG to count unitigs in bacterial populations☆16Feb 15, 2023Updated 3 years ago
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 2 years ago
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆13Oct 18, 2021Updated 4 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆23Jul 26, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆12Oct 24, 2025Updated 5 months ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 5 years ago
- ☆17Jan 26, 2020Updated 6 years ago
- Code and example of the D-SPIN framework☆25Mar 12, 2026Updated 3 weeks ago
- Variant-aware CRISPR off-target nomination☆24Jan 26, 2026Updated 2 months ago
- Epigenomics Program pipeline to analyze SHARE-seq data.☆23Mar 30, 2025Updated last year
- Source codes and examples for DeepPrime☆13Dec 17, 2024Updated last year
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21May 22, 2023Updated 2 years ago
- Shiny ClinVar web server source code☆12Apr 29, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆43Mar 7, 2025Updated last year
- Symbolic Kinetic Models with Python☆35Jun 4, 2025Updated 10 months ago
- A Python-based Effective Feature Generation Tool from DNA, RNA, and Protein Sequences☆97Aug 14, 2022Updated 3 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- Efficient querying of biological databases☆43Oct 27, 2025Updated 5 months ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago
- ☆59Sep 27, 2021Updated 4 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated last month
- dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go…☆13Mar 26, 2018Updated 8 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Error-controlled interaction discovery in machine learning models☆21Jun 24, 2025Updated 9 months ago
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Oct 23, 2024Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆14Updated this week
- ☆12Feb 13, 2019Updated 7 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated last month