NCBI-Hackathons / NCBIComputationalCookbook
Jupyter notebooks to more effectively leverage computational resources at NCBI.
☆29Updated 7 years ago
Alternatives and similar repositories for NCBIComputationalCookbook:
Users that are interested in NCBIComputationalCookbook are comparing it to the libraries listed below
- Materials for a workshop introducing machine learning to biologists☆22Updated last month
- ☆41Updated 6 years ago
- A collection of useful functions for bioinformatics data analysis☆22Updated 9 months ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆20Updated last year
- Sphinx documentation source for a computational genomics tutorial.☆33Updated 4 years ago
- gatk4 RNA variant calling pipeline☆46Updated last week
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆20Updated 7 years ago
- ☆20Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆25Updated 11 months ago
- IPAW: a Nextflow workflow for proteogenomics☆27Updated 8 months ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆40Updated 8 years ago
- Various bioinformatics tutorials☆59Updated last year
- The wiki repo, with pull request enabled, for the rnaseq_tutorial☆26Updated 4 years ago
- Find common blocks and differences between DNA sequences☆41Updated 2 weeks ago
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆27Updated 6 months ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated last week
- Programming for Biology 2019☆38Updated 2 years ago
- ☆28Updated 3 weeks ago
- Validate FastQ Files☆36Updated 6 years ago
- This repository contains Jupyter Notebooks containing GATK Best Practices Workflows☆26Updated 5 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated 11 months ago
- ☆79Updated 4 months ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆63Updated 3 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆53Updated 4 years ago
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆10Updated 3 years ago
- Universal RObust Peak Annotator☆15Updated last year
- GraphBio: a shiny web app to easily perform popular visualization analysis for omics data☆33Updated last year
- Bioinformatics for Benched Biologists☆22Updated 4 years ago
- ☆36Updated last week
- This repository contains course materials from JAX-BD2K workshop.☆31Updated 5 years ago