NCBI-Hackathons / RNA-Seq-in-the-CloudLinks
An Easy to Use Analysis System for All Human Public bulk RNAseq Data!
☆18Updated 2 years ago
Alternatives and similar repositories for RNA-Seq-in-the-Cloud
Users that are interested in RNA-Seq-in-the-Cloud are comparing it to the libraries listed below
Sorting:
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆20Updated 8 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Updated 6 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 6 months ago
- Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)☆18Updated 10 years ago
- Workshop for CNV analysis with Bioconductor☆17Updated 5 months ago
- Statistical power studies for multi-omics experiments.☆32Updated 5 months ago
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Updated 4 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Single cell RNA Seq data analysis with quantitative phenotypes☆14Updated 4 years ago
- ☆13Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆11Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Code and figures accompanying the paper, "Single-cell alternative splicing analysis with Expedition reveals splicing dynamics during neu…☆20Updated 7 years ago
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 7 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 4 years ago
- a parallel R package for detecting copy-number alterations from short sequencing reads☆23Updated 3 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- A python tool to do comparative analysis of mulitple single cell datasets.☆22Updated 5 years ago