NCBI-Hackathons / RNA-Seq-in-the-CloudLinks
An Easy to Use Analysis System for All Human Public bulk RNAseq Data!
☆18Updated 2 years ago
Alternatives and similar repositories for RNA-Seq-in-the-Cloud
Users that are interested in RNA-Seq-in-the-Cloud are comparing it to the libraries listed below
Sorting:
- Materials presented at the BiocNYC meet-up☆12Updated 6 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- interactive plots for differential expression analysis☆34Updated 2 months ago
- Ritornello is a high fidelity control free ChIP-seq peak calling algorithm☆13Updated 7 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 13 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 10 months ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- ☆10Updated 6 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last month
- ☆13Updated 6 years ago
- DriverPower☆26Updated 7 months ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆47Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated 8 months ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 6 years ago
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Updated 4 years ago