☆21Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for hypercluster
Users that are interested in hypercluster are comparing it to the libraries listed below
Sorting:
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Feb 1, 2021Updated 5 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- ☆20Mar 28, 2017Updated 8 years ago
- Portable Crystal binary distributions for Linux on x86_64☆15Mar 22, 2021Updated 4 years ago
- ☆12Aug 23, 2023Updated 2 years ago
- Bioinformatics Open Source Sequence machine☆32Mar 12, 2026Updated last week
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- nimble aligner that will map your reads to the references on a laptop☆11Jun 29, 2017Updated 8 years ago
- Lossless VCF compression☆21Mar 4, 2022Updated 4 years ago
- ☆15Dec 8, 2022Updated 3 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- ☆20Aug 18, 2020Updated 5 years ago
- Lightweight C++ library for reading FASTA and FASTQ files.☆11Feb 16, 2019Updated 7 years ago
- ☆15Jan 16, 2024Updated 2 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆39Jul 9, 2021Updated 4 years ago
- ☆13Jan 23, 2020Updated 6 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Oct 31, 2018Updated 7 years ago
- ☆11Dec 9, 2022Updated 3 years ago
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly☆15Nov 27, 2019Updated 6 years ago
- DartMinHash: Fast Sketching for Weighted Sets☆12Dec 8, 2025Updated 3 months ago
- functions and algorithms for single cell RNA-seq analyses☆12Jan 26, 2021Updated 5 years ago
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- S3norm ver2 + IDEAS epigenetic state / master peak list☆12Sep 22, 2023Updated 2 years ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆16Apr 2, 2024Updated last year
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 6 years ago
- Hidden Markov Model based Copy number caller☆20Dec 9, 2025Updated 3 months ago
- ☆24Apr 2, 2021Updated 4 years ago
- ☆11Jun 29, 2021Updated 4 years ago
- ☆10Jun 16, 2022Updated 3 years ago
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 2 weeks ago
- URMAP ultra-fast read mapper☆38Jun 15, 2020Updated 5 years ago
- For bluntifying overlapped GFAs☆13Jul 26, 2024Updated last year
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated 10 months ago
- a cythonized, extended version of the interval search tree in bx☆30Jun 4, 2019Updated 6 years ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Aug 23, 2023Updated 2 years ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated last year
- C++ library for CUDA accelerated computation of Non-negative Matrix Factorizations (NMF)☆12Mar 22, 2017Updated 8 years ago
- Substring index for paths in a graph☆60Mar 11, 2026Updated last week