emily-mitchell / normal_haematopoiesis
☆8Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for normal_haematopoiesis
- Transposable element expression at unique loci in single cells with CELLO-seq☆8Updated 4 months ago
- Scripts used for the ACT paper☆12Updated 3 years ago
- R Package for phasing of single cell Strand-seq data☆10Updated 7 months ago
- A pipeline for Smooth-seq data analysis.☆10Updated 3 years ago
- Analysis pipeline for our circSC manuscript☆12Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- ☆11Updated last year
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆19Updated 2 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆12Updated 2 weeks ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆13Updated 5 years ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 3 years ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆11Updated 3 months ago
- ☆11Updated 6 years ago
- ☆22Updated last year
- Whole genome workflows☆12Updated this week
- ☆11Updated 3 years ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆14Updated 4 years ago
- ☆10Updated 2 years ago
- GENome Organisation Visual Analytics☆13Updated 2 years ago
- Package to design primers for MutaSeq and related methods☆11Updated 3 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆17Updated last year
- ☆11Updated 3 years ago
- ☆15Updated 3 years ago
- Toolkit for single-cell copy number analysis☆18Updated 3 weeks ago
- ☆18Updated 3 months ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆15Updated 6 months ago
- ☆11Updated 2 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 4 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated last year
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago