dohlee / snakemake-wrappers
Snakemake wrappers for bioinformatics.
☆18Updated last year
Related projects: ⓘ
- A list of alternative splicing analysis resources☆33Updated last year
- RNA editing quantification in deep transcriptome data☆15Updated last year
- ☆46Updated 2 years ago
- ☆14Updated 2 years ago
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆26Updated this week
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆69Updated 3 weeks ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆14Updated 2 years ago
- tspex: tissue-specificity calculator☆26Updated last year
- ☆29Updated 3 years ago
- Time-Course Multi-Omics data integration☆24Updated 5 months ago
- Analysis pipeline for the GUIDE-seq assay.☆23Updated last month
- ☆20Updated 4 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆19Updated last year
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆31Updated 5 months ago
- MeRIPseqPipe:An integrated analysis pipeline for MeRIP-seq data based on Nextflow.☆31Updated 4 months ago
- Reduce + Visualize Gene Ontology☆21Updated 6 months ago
- Motif manipulation functions for R.☆25Updated last week
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆24Updated 3 months ago
- ☆29Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆27Updated 3 years ago
- Find circRNAs in RNA-seq data.☆13Updated 8 years ago
- Merge fastq files split over lanes☆18Updated 6 years ago
- ☆16Updated last month
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- IDR☆30Updated last year
- A guide to running MaxQuant in Linux☆30Updated 4 years ago
- RiboPlotR package for Ribo-plot☆13Updated last year
- ☆25Updated last year
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆26Updated 6 months ago