eugenebang / DREAMwalkLinks
The official code implementation for DREAMwalk in Python.
☆22Updated last year
Alternatives and similar repositories for DREAMwalk
Users that are interested in DREAMwalk are comparing it to the libraries listed below
Sorting:
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆34Updated last year
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- ☆16Updated 3 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- ☆17Updated 10 months ago
- ☆67Updated 2 years ago
- ☆57Updated 5 years ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- ☆11Updated 5 years ago
- ☆31Updated 5 months ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆50Updated 4 years ago
- ☆36Updated last year
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆80Updated 3 years ago
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆124Updated 2 years ago
- ☆87Updated 2 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- ☆56Updated 4 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 8 months ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 4 years ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 3 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated last year
- ☆31Updated 6 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆39Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 11 months ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated 2 years ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Updated 3 years ago
- ☆28Updated 5 years ago
- ☆13Updated 2 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆10Updated 2 years ago