dnanexus-archive / dot
Dot: An interactive dot plot viewer for comparative genomics
☆6Updated 5 years ago
Alternatives and similar repositories for dot:
Users that are interested in dot are comparing it to the libraries listed below
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Merge transcriptome assemblies☆30Updated 8 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Analysis tool for Nanopore sequencing data☆33Updated 5 years ago
- Rank-based Gene Ontology analysis of gene expression data☆40Updated 2 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 2 years ago
- Edinburgh Genomics MinION training 2016☆34Updated 8 years ago
- ☆35Updated last year
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆31Updated last year
- Exact Tandem Repeat Finder (not a TRF replacement)☆47Updated 5 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 2 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Assembly by Reduced Complexity (ARC)☆41Updated 8 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 8 years ago
- Visualize whole genome alignments as linear maps☆70Updated 3 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆65Updated 6 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆69Updated 2 years ago
- Maximum likelihood demultiplexing☆46Updated last year
- ☆17Updated 6 years ago
- Adapters for trimming☆30Updated 5 years ago
- ☆61Updated 4 years ago
- Python package and routines for merging VCF files☆29Updated 3 years ago
- UCSC Nanopore☆43Updated 5 years ago
- Evolutionary Transcriptomics with R☆41Updated this week
- Experimental pipeline for correcting nanopore reads☆39Updated 7 years ago
- A (very) simple script to QC Hi-C data.☆25Updated last month