Select primer sets for selective whole genome amplification (SWGA)
☆33Mar 26, 2019Updated 7 years ago
Alternatives and similar repositories for swga
Users that are interested in swga are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Plot one-dimensional data using quasirandom noise and density estimates☆25Dec 20, 2023Updated 2 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆16Nov 18, 2024Updated last year
- Methods to determine sequence element (unitig) presence/absence☆23Mar 6, 2026Updated 2 weeks ago
- Selective and Recursive local Assembler☆15Jan 31, 2022Updated 4 years ago
- CRyPTIC data processing pipelines☆34Jul 18, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An SRA tool that takes as input local fastq file from a clinical infection sample, identifies and removes any significant human read, and…☆53Jul 24, 2025Updated 8 months ago
- ☆17Jul 27, 2023Updated 2 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Aug 19, 2017Updated 8 years ago
- Official place for proposals and details around monkeypox virus lineage designations☆23Dec 9, 2025Updated 3 months ago
- Optimise PCR primer-set grouping for genetics research☆18Feb 24, 2026Updated last month
- Population Genomics in R workshop☆12Mar 24, 2024Updated 2 years ago
- vSNP -- validate SNPs☆22Sep 19, 2024Updated last year
- A method of assessing sequence complexity based on kmer frequencies☆33Apr 9, 2018Updated 7 years ago
- Variant call verification☆16May 12, 2025Updated 10 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 2 years ago
- Bioinformatics pipeline for nanopore sequencing data☆11Jan 4, 2019Updated 7 years ago
- Visualise interstrain recombination from environmental samples.☆27Apr 18, 2019Updated 6 years ago
- Documentation for PEP specification and all PEPkit software☆10Updated this week
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA☆39Nov 24, 2015Updated 10 years ago
- ☆15Aug 1, 2021Updated 4 years ago
- Abbreviate strings to short, unique identifiers☆24May 10, 2022Updated 3 years ago
- Fast bird catching fishes AKA realtime very high accuracy CPU basecaller for Oxford nanopore reads.☆15Oct 6, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Apr 19, 2018Updated 7 years ago
- INC-Seq: Accurate single molecule reads using nanopore sequencing☆16Sep 11, 2020Updated 5 years ago
- Simulate mutations in genomes☆15Jun 15, 2020Updated 5 years ago
- ☆14Jun 3, 2022Updated 3 years ago
- Population Genetics Hackathon, to be held at NESCent on March 16-20, 2015☆18Jul 13, 2015Updated 10 years ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆244Jan 18, 2024Updated 2 years ago
- Assemble bacterial isolate genomes from Nanopore reads☆129Jan 22, 2025Updated last year
- Parse NCBI taxonomy and accessions to find taxonomic assignments☆81Jul 24, 2025Updated 8 months ago
- reference-based long read assemblies of bacterial genomes☆51Aug 9, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Infrastructure code to support DNA pipeline☆38May 5, 2015Updated 10 years ago
- Bonsai: Fast, flexible taxonomic analysis and classification☆70Apr 9, 2024Updated last year
- Tutorial for using MCMCTree as implemented by Brown Lab at SIUC. For divergence time estimation on UCE datasets, for dendrobatid frogs.☆10Jun 19, 2020Updated 5 years ago
- A tool for removing redundant genomes from a set of assemblies☆79Sep 10, 2025Updated 6 months ago
- Convert sequence IDs between ucsc/refseq/genbank☆16Aug 28, 2018Updated 7 years ago
- LorMe package for R：Lightening One-code Resolving Microbial Ecology Program☆14Jan 13, 2026Updated 2 months ago
- IRIDA Next☆13Updated this week