databio / sciquillLinks
Author academic documents in markdown
☆12Updated last week
Alternatives and similar repositories for sciquill
Users that are interested in sciquill are comparing it to the libraries listed below
Sorting:
- A workflow for creating small NGS test data sets, useful for continuous integration.☆23Updated last year
- [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data☆73Updated 2 months ago
- create, manage, and upload track hubs for use in the UCSC genome browser☆54Updated last year
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 8 months ago
- Glimma R package☆50Updated last year
- Response to blog post about Salmon☆37Updated 8 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- Brings SummarizedExperiment to the tidyverse☆26Updated this week
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 3 months ago
- Access nextflow variables from python scripts or notebooks☆20Updated 4 years ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- Representation and manipulation of genomic intervals☆46Updated 2 months ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- A tidy interface for coverage analysis☆30Updated 5 years ago
- Calculate and plot distributions of genomic ranges☆26Updated 4 months ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆15Updated 5 years ago
- Simple walk-throughs of interacting with the DCP as a downstream data consumer.☆17Updated last month
- ☆17Updated last year
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last week
- Implementation of the treeSeg algorithm as an R package.☆14Updated 3 years ago
- Visualize Cytometry data with ggplot2☆59Updated 2 months ago
- tools in python and R for analyzing biological count data, especially from single cell RNAseq☆22Updated last year
- A Github action for running a Snakemake workflow☆58Updated 2 months ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 4 months ago
- Create QC and summary reports for Alevin output☆31Updated last month
- ☆19Updated 2 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 9 months ago